Strain | Pseudomonas aeruginosa BWHPSA017 genomic scaffold adgeW-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCGACCTCATCGGCGACCACCTGCATGAGACGCTCGGCCTCGCCACCCGGCGGATATTCACGGGGAAATTCCGCCGCCCGCAGTAACAGTTCGCGCAGC AGGCCGGACACCTCCAGTACCCGGCAACCGCCGGGCAGCGAACGATCCAGGTAGAGACTGCGGAACAGCACAGGGTTGCAAGCCTCCGCGGCGTGCCGGA CGCCCGGCGGAATCCACAGCGCCCGCTGCGCCGGCACCAGATAGCTGTGCCGCTCGGTGCTGGCGCGCAAGGTGCCGCTGGCGGCGTACATCAGTTGGCC CCAGGGGTGCTCGTGCATCTCCACCCGGTGCCCGGCGGGCATCTCGAAGGCGCGCAGGTACACCGCGCAGGGCAGGCTGCGGAATCGCGGCAGGTCGCGT TCTTGTCCCGTTTGCGGCATCGGTTGTCCCCATCCGTCGAGTGAGCGGTGCGCGGCCGATGGTAGCGTGTGGCTCCCCATAGACAAACCGGAGCCACGCC
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DNA Sequence for Gene |
>Q030_00741
ATGAGCAGTCATCGCCCGCAACATCGCCTGTCCGTTCCCGATATCCGGCGCCGCAAGGGTGCCGGCAGCCTGGTGGCGCTGACCGCCTACAGCACGCCCA TGGCCCGCCTCCTCGATCCGCATGCCGACCTGCTGCTGGTCGGCGATTCGCTGGGCATGGTGCTCTATGGCATGCCCAGCACCCTGGGAGTGAGCCTGGA GATGATGGTCGCCCACACCCTGGCGGTGATGCGCGGCAGTCGGCGCGCCTGCGTGGTGGCCGACTTGCCGTTCGCCAGCTACCAGGAATCGCCCCGACAG GCGTTCCGCAACGCCGCACGCCTGCTGGCCGACAGCGGCGCCCAGGCGGTGAAGCTGGAAGGCGGTGAGGAAATGGAAGAAACCGTGGACTTCCTGGTAC GCCGTGGCATACCGGTGCTCGCCCATATCGGCCTGATGCCGCAGCAGGTCAACGCCATGGGCGGCTTCAAGGCCCAGGGGCGTGACCCGGAAAGCGCCGA ACGGGTACGCCGCGACGGCCTCGCCATGCAGCGCGGCGGCGCCTTCGCGGTGGTCATCGAAGGCGTAGGCGAGCCGCTGGCCCGTCGCCTTAGCGAAGAA CTGGCGATCCCCTGCATCGGTATCGGCGCCTCGCCGGCCTGCGACGGCCAGGTACTGGTCAGCGAGGACCTGCTCGGGCTAAGCGGCGAACAGGTACCGC GCTTCGTCGAACGCTACGCGCGCCTCGACCGGGAAATCGACGAGGCGGCCCGGCGCTTCGCCGAGGACGTGCGCGAACGGCGCTTCCCCGAGGCCAGGCA CTGCTTCGCCATGCGCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGCGGTCTCAGGCGAAGACTTCCGCCAGCAGGTCGTCCATCGCCTGGAAGGCACGCCGGGAGGTCCTGGCGTCATAGTGCATCTTGCCCGGCAGCTT GGCGTTCGGATCGGTGAAGGAATGCACCGCGCCGCCGTAGCTGGTGAGCTGCCAGTCGACGCCGGCATCGGTCATCTCCCTGGCGAAGGCCGGCAACTGC TCGCGCGGCACCAGCGGATCGGAGGCGCCGTCGAGGACCAGTACCGCGCCCTTGATATTCCTGGCATGCGCCGGGTCCGGCGTATCCAGGGTGCCATGGA AGGACACGAAGGCCTTCAGCTCGGCGCCGTCGCGAGCCAGCTCCAGCACGCAGCAACCGCCGAAGCAGAAACCGAAGGCGGCCTGGCGGGTCGTATAGAC AGCCGCGAGCGCCTGTCCGCGCAAGGCCGCCAGCGCTGCCTGCATGCGCTTGCGCAGCAGGGCCCGGTCGTTCTTCAGCGGCATCATCGCCGCGCCCGCC
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Amino Acid Sequence |
>3-methyl-2-oxobutanoate hydroxymethyltransferase
MSSHRPQHRLSVPDIRRRKGAGSLVALTAYSTPMARLLDPHADLLLVGDSLGMVLYGMPSTLGVSLEMMVAHTLAVMRGSRRACVVADLPFASYQESPRQ AFRNAARLLADSGAQAVKLEGGEEMEETVDFLVRRGIPVLAHIGLMPQQVNAMGGFKAQGRDPESAERVRRDGLAMQRGGAFAVVIEGVGEPLARRLSEE LAIPCIGIGASPACDGQVLVSEDLLGLSGEQVPRFVERYARLDREIDEAARRFAEDVRERRFPEARHCFAMRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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