Pseudomonas aeruginosa PAO1, PA4552 (pilW)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Sequence Data

Strain Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GAAGTGCTGGTCGCCCTGCTGCTGATCAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCA ACAAGGCAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCCACGCAATCCGACTT CTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGATCAAGGACCGCCTGGGATGCTGGGCGGAACAGGTG AAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACTACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGG AAATCCGCCTGGCCTGGCGCGGCAAGCAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCC
DNA Sequence for Gene
>PA4552 |pilW
ATGAGCATGAACAACCGCTCCCGACGGCAATCGGGCCTGTCCATGATCGAACTACTGGTGGCCCTCGCCATCAGCAGCTTCCTGATTCTCGGGATTACCC AGATCTACCTGGACAACAAGCGCAACTACCTGTTCCAGCAAGGCCAGGCAGGCAACCAGGAAAACGGACGCTTCGCCATGATGTTCCTGGACCAGCAACT GGCCAAGGTGGGTTTCCGTAGGCGTGCGGACGACCCCAACGAGTTTGCCTTCCCGGCGCAGCAGAAAACCGCCTATTGCGAGGCATTCAAAGCCGGCTCA ACCCTGGTGCCCGCCGTGGTCAAGGCCGGCCAGAGCGGATTCTGCTACCGCTATCAACCGGCGCCAGGCGAAGCCTACGACTGCGAAGGCAACTCGATCA CCACCCCTAGCGATCCCTTCGCTACCGCCCAGGCCATCACCGCACGCGTTCTGTTCGTTCCCGCGACCGCCGATGTCCCCGGCAGCCTCGCCTGCTCCGC GCAGACAATCAAGGAAAAAGGCCAGGAGATCGTCAGCGGCCTGGTCGACTTCAAGCTCGAGTACGGCGTCGGCCCGACCATGGCCGGCAAACGCGAGGTG GAAAGCTTCGTCGAACAGGCCAACATCGCCGACCGTCCGGTGCGTGCCCTGCGCTACTCCGCGCTGATGGCCAGCGACAAGAACCTGCGCCAGGGCGACA GCAAGACCCTGGACGATTGGATCACGCTCTACCCCTCGTCCAAGACCAGCCTGCAAGGCAACGACAAGGACCGCCTCTACCAGATCGCCAAGGGCAGCCA GACACTCAGGAATCTCGTGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAACTTCCCTGCACAACAGCGCGGCGCCACGCTGGTCATCGCCCTGGCGATCCTGGTGATCGTCACCCTGCTGGCGGTCTCGAGCATGCGCGAAGTGGT ACTGGAAAGCCGCATCACCGGCAACGTCATCGAACAGACTCGCTTGCAGAACGCCGCCGAGTCCGGACTCCGCGAAGGCGAGCGGCGCTTCGTCAACACC CTGCGTCCGCCGGAGCCCGGCACCGGTTGTACGGCCGACAACGTGGCCCGCCCCTGCCTGCTGGACCTCGCCGCGCTGAACCTGAAGCTGGCGGACACCC ACCAGAATCCGGTCGGCGTGCTGAAGGGCATCGCCAATACCTGGATGAGTTACCGCGGCAGCGACATCAGCAGCGCGACCACCGCGGGCACGCTCTACAG CGTGCAGTGGAACAACCTGCCCATTCCCTCGGGCGGCCAGGTCAACGAAGCGGAAAGCCCCGAATACGGCAACCTGATGCGCGGCATCGGCACCTTCTAC
Amino Acid Sequence
>type 4 fimbrial biogenesis protein PilW
MSMNNRSRRQSGLSMIELLVALAISSFLILGITQIYLDNKRNYLFQQGQAGNQENGRFAMMFLDQQLAKVGFRRRADDPNEFAFPAQQKTAYCEAFKAGS TLVPAVVKAGQSGFCYRYQPAPGEAYDCEGNSITTPSDPFATAQAITARVLFVPATADVPGSLACSAQTIKEKGQEIVSGLVDFKLEYGVGPTMAGKREV ESFVEQANIADRPVRALRYSALMASDKNLRQGDSKTLDDWITLYPSSKTSLQGNDKDRLYQIAKGSQTLRNLVP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site