Pseudomonas aeruginosa PAO1, PA4546 (pilS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGAAAACCAGGATCACAGCGCCGACGACGAGAAGCCGGAGAGCGATGACGACGAAGACTCCGGCCGCTCCTGGTGGAGCTACATGACCTTCGGTCTC TTCGACTGATCGCACGAAACACCGAAGGGAGGCGCAGGCCTCCCTTCTTTTTGCCCGCCGCCATGCCTCTTCCAGCGCCAAACGCCGCACAGCCTGGACC TTCCCGGCTGGGATCGAGCCGGCGGCTTGGCTAAACTGCAGCTTTCTCCAGCCTCCGAGATCACCATGGGCCTTTTCCGCCTCCTGTTCTGGATCGCCCT GATCGCCATCGCGTTCTGGCTCTGGCGTCGCTTTACCCGTCCCACTCCGCGCCAGCAGCAACGTCCGCAGGACGAGCCGAGCGCATCGCCGATGGTCCGC TGCGCCCATTGCGGCGTCCACGTGCCGCAGGCCAACGCCCTCGCCCACGAACAACGCTGGTATTGCAGCCAGGCGCACCTGCGCCAGGACCAGGGCGACC
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| DNA Sequence for Gene |
>PA4546
|pilS
GTGCGCGCTGAACGGCTACGGCTGAGCGAGGAGCAGGGGCAACGCATCCTCCGTCTGTACCACCTGTACCGCCTGACCATCGGCCTGGTACTGGTCCTGC TGATCTCCAGCGAACTGGAAGATCAGGTCCTCAAGCTCGTCCACCCTGAACTGTTCCATGTCGGCAGTTGGTGCTACCTGGTCTTCAACATCCTGGTCGC GCTGTTCCTGCCGCCGTCACGGCAATTGCTGCCGATCTTCATCCTCGCGCTCACCGACGTGCTGATGCTTTGCGGCCTGTTCTACGCAGGTGGCGGCGTA CCCAGCGGCATCGGCAGCCTGCTGGTGGTGGCGGTGGCCATTGCCAACATCCTGCTGCGCGGGCGCATCGGCCTGGTCATCGCGGCGGCGGCCAGCCTCG GCCTGCTCTACCTGACCTTCTTCCTCAGCCTGAGCAGTCCGGACGCCACCAACCACTACGTCCAGGCCGGCGGCCTCGGCACCCTGTGCTTCGCCGCCGC GCTGGTGATCCAGGCTCTGGTGCGGCGCCAGGAGCAGACCGAAACGCTGGCCGAAGAACGCGCCGAGACGGTCGCCAACCTGGAGGAACTCAACGCATTG ATCCTGCAGCGCATGCGCACCGGCATCCTCGTGGTCGATAGCCGTCAGGCCATCCTCCTCGCCAACCAGGCCGCCCTCGGCCTGCTCAGGCAGGACGACG TGCAGGGCGCCAGCCTCGGCCGCCACAGCCCGATGCTGATGCACTGCATGAAGCAATGGCGCCTGAATCCCAGCCTCCGTCCGCCGACGCTCAAGGTGGT GCCGGATGGCCCGACGGTGCAACCCAGCTTTATCAGCCTCAACCGCGAAGACGACCAGCACGTGCTGATCTTCCTCGAAGACATTTCGCAGATCGCCCAG CAGGCGCAGCAGATGAAGCTGGCCGGTCTCGGCCGCCTGACCGCCGGCATCGCCCATGAGATCCGCAACCCGCTGGGCGCGATCAGCCACGCCGCCCAAC TGCTGCAGGAGTCAGAGGAACTGGATGCCCCGGACCGACGCCTGACGCAGATCATCCAGGACCAGTCGAAGCGGATGAACCTGGTCATCGAGAACGTCCT GCAGCTCTCCCGTCGCCGCCAGGCCGAACCGCAGCAGCTCGACCTGAAGGAGTGGCTTCAGCGGTTCGTCGACGAATACCCCGGCAGGCTGCGCAACGAC AGCCAACTGCACCTGCAGCTCGGTGCCGGCGACATCCAGACCCGCATGGACCCACATCAGTTGAACCAGGTGCTGAGCAACCTGGTGCAGAACGGTCTTC GCTACAGCGCCCAGGCGCACGGGCGCGGCCAGGTCTGGCTGAGCCTCGCGCGCGACCCGGAGAGCGACCTGCCGGTGCTGGAAGTCATCGACGACGGTCC CGGCGTACCGGCGGACAAACTGAACAACCTGTTCGAACCCTTCTTTACTACAGAAAGCAAAGGCACCGGCCTGGGCCTCTATCTCTCCCGCGAGCTCTGC GAGAGCAACCAGGCACGGATCGACTACCGCAATCGCGAGGAAGGCGGCGGCTGCTTCCGCATCACCTTCGCCCACCCACGCAAACTCAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGAAGCCGCACGCATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAAGCTGGA CACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGCCGTTCGACCTGTGCCTCACCGACATGCGCCTGCCGGACGGCAGCGGC CTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATGATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGG CCGGTGCCTTCGACTTCCTCACCAAACCGGTCGACCTCGGTCGCTTGCGGGAGCTGGTGGCAACCGCCCTGCGCTTGCGCAACCCGGAAGCCGAGGAAGC GCCGGTGGACAACCGCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTACATCAGT
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| Amino Acid Sequence |
>two-component sensor PilS
MRAERLRLSEEQGQRILRLYHLYRLTIGLVLVLLISSELEDQVLKLVHPELFHVGSWCYLVFNILVALFLPPSRQLLPIFILALTDVLMLCGLFYAGGGV PSGIGSLLVVAVAIANILLRGRIGLVIAAAASLGLLYLTFFLSLSSPDATNHYVQAGGLGTLCFAAALVIQALVRRQEQTETLAEERAETVANLEELNAL ILQRMRTGILVVDSRQAILLANQAALGLLRQDDVQGASLGRHSPMLMHCMKQWRLNPSLRPPTLKVVPDGPTVQPSFISLNREDDQHVLIFLEDISQIAQ QAQQMKLAGLGRLTAGIAHEIRNPLGAISHAAQLLQESEELDAPDRRLTQIIQDQSKRMNLVIENVLQLSRRRQAEPQQLDLKEWLQRFVDEYPGRLRND SQLHLQLGAGDIQTRMDPHQLNQVLSNLVQNGLRYSAQAHGRGQVWLSLARDPESDLPVLEVIDDGPGVPADKLNNLFEPFFTTESKGTGLGLYLSRELC ESNQARIDYRNREEGGGCFRITFAHPRKLS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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