Pseudomonas aeruginosa BWHPSA018, Q031_05487
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA018 genomic scaffold adgfT-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAACTGTCGCAGCGGGACGCCGATTTGGCGTCCTTGATGCGTAGCCTCTGTATCGATGAAATCTCATCGATCAATCCAATATTGTTTTCCATGATTAGCT ATGCTTTTGCGAATCCAAAAAGAAGAGACGTTGCGCTGACCTGCCCCCCGATTTCAGTACCATGTCAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAGAC GGCAGTGAAAAAGCGTTTTACCGAAGAGCAGACTCTCGACTTCCTCAAGCAGGCGGAGGCCGGTGTGCCGGTGAAGAAACTGTGTCGCCGACACGGCTTC AGTGATGCCTCGTTCTACACCTGGCGGGCCAAGTTTGGCGGTATGACCGTGGCGGACGCCAAACGGTTGAAGGATATTGAACTGGAAAACAGCCGATTGA AGAAGTGGCTCGCCGAGGCCCACCTCGACATCGAGTCGCTGAAAGTGGTCGCCCGGGGAAAAGGGTAAGCCCGACAGCACGGCGGGAGGCGGTGCAGGAG
|
|
| DNA Sequence for Gene |
>Q031_05487
ATGCAGGCGCGAACCGGCATCTCCGAGCGTCGTGCCTGTCAGTTGATCGGGCTGTCCCGCTCGGTGTTGCGCTACCAGCCGCGAGCCAGTGTGCAAAACA CCGAGCTGCAAGCACAACTGGTGGAACTGGCCCAAGAGCGCCGGCGCTTTGGCTATCGCCGCCTGCACATCCTGCTGCGGCGTGCTGGCGTGCAGGTCAA CCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACGGCGGCGCCGCCGCCATGGCGTCGCGGTGGAGCGCGAACGTCTGAGTTTG CCGAGCGCACCAAACCAGGTCTGGTCGATGGACTTCGTCTTCGATGCACTGAGCACCGGGCGGCGGATCAAATGCCTGACGGTGGTCGATGACTTCACCA AGGAGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGCGGCTTTCGTGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGAT CCGCACCGACCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTGGTAAGCCCACG CAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATCGCGG CCTGGCGGCGGGATTACAACGAACACCGACCGCACAGCGCGATTGGCAATCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAGCT GAAGCAGGAAAAATTAATATCAACCCCAGGGCCTACTAACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAGCGGTACTAAAACTGGGGGCAGGTCACTGGATCTGCATACCCGGCGGGTGATCGGTTGGGCGTTCTCGGCCAAGCCGGATGCCGAGCTGGTGATCAA GGCCCTGGACATGGTCTACGAACAGCGCGGCAGGCCACAGCAGGTGCTGTTCCATAACTGGATCAGGCCGCATCAATTCAACGACGGGCTACCGCCTGCG GTGGCCGAAGAAAAACTCAACCCACTGTCCGGGATGGGTTGACCACTACACTGGCACTTCAGCAGCGCGATTGGGCAAGGTTGTTCCAGACGTAGTGCCT ACCGCGGTTTTGCTCCTATGTGCCTAATCTGGAGGGTTCCCCGAATAATTGCCAACCTCTTCAAGGCCGATAGCCGATGCGCCGAAAGCTCGAGATGCGG TAGGCATGTCTCTCCGGTTTTTAGCCTGTTCAGATGAAAGCCTTGGAAAGCAAAAAATAACTACCGAATGGAGAGAATTCCCTGCAGAGTGAGCTAACGT
|
|
| Amino Acid Sequence |
>transposase
MQARTGISERRACQLIGLSRSVLRYQPRASVQNTELQAQLVELAQERRRFGYRRLHILLRRAGVQVNHKRIYRLYRAAGLMVKRRRRRHGVAVERERLSL PSAPNQVWSMDFVFDALSTGRRIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARFRGYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPGKPT QNAFIESFNGKFRDECLNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGNLTPAEFAASWRTRQQQLKQEKLISTPGPTN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|