Pseudomonas aeruginosa PAO1, PA4541 (lepA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF07581 The GLUG motif IPR011493 GLUG 1209 1234 1.9E-5
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 54 389 2.1E-79
Gene3D G3DSA:2.160.20.110 - - - 1073 1193 4.0E-10
Gene3D G3DSA:2.160.20.110 - - - 772 992 6.6E-22
SMART SM00912 Haemagg_act_2a IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 51 165 4.0E-45
PANTHER PTHR12338 AUTOTRANSPORTER - - 1 854 0.0
Gene3D G3DSA:2.160.20.110 - - - 1257 1411 3.8E-13
Pfam PF13018 Extended Signal Peptide of Type V secretion system IPR024973 ESPR domain 1 48 6.9E-14
Pfam PF07581 The GLUG motif IPR011493 GLUG 1121 1147 0.0027
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 45 339 2.13E-50
Pfam PF07581 The GLUG motif IPR011493 GLUG 1035 1060 0.0025
MobiDBLite mobidb-lite consensus disorder prediction - - 615 636 -
Pfam PF05860 TPS secretion domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 52 301 2.2E-47
NCBIfam TIGR01901 JCVI: filamentous hemagglutinin family N-terminal domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 87 160 3.9E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.