Strain | Pseudomonas aeruginosa BWHPSA018 genomic scaffold adgfT-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCTGGAGCGCCGACGAACTGGCGCGCTTCACCCGCCTGGTACAGGATTCGGTGGGCTACGACGCCAGCCGCGGCGACAGCGTCAGCGTGATCAACGCGC CGTTCGCCCCGGCCCAGGCCGAAGAGATCGACAGCATTCCGTTCTACTCGCAGCCGTGGTTCTGGGACATCGTCAAGCAGGTGCTCGGCGTGCTGTTCAT CCTGGTCCTGGTGTTCGGCGTGCTGCGTCCGGTGCTGAGCAACATCACCGGCGGCGGCAAGGGCAAGTCGCTGGCCGGTGGCGGCGGTCGCGACGGCGAC CTGGCGCTGGGCGAGAGTGGCCTGGAAGGCTCGCTGGCCGACGACCGGGTGAGCATCGGCGGGCCGTCGAGCATCCTCCTGCCGAGCCCCACGGAGGGGT ATGATGCGCAATTGAACGCGATCAAGAACCTGGTCGCACAGGACCCGGGCCGCGTCGCCCAGGTCGTGAAAGAGTGGATCAACGCCGATGAGTAAGTGCC
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DNA Sequence for Gene |
>Q031_01650
ATGAGTGAGAATCGTCTCGCCGCCAAACTGACCAAGGTCGACAAGGCCGCCATCCTGCTCCTGTCGCTCGGCGAGACCGACGCGGCGCAGGTGCTGCGGC ACATGGGGCCGAAAGAGGTGCAGCGGGTCGGCGTGGCCATGGCGTCGATGCGCAACGTGCACCGCGAACAGGTCGAGCAGGTGATGGGCGAGTTCGTCGA AGTGGTCGGCGACCAGACCAGCCTCGGCGTCGGTGCCGACGGCTACATCCGCAAGATGCTCACCCAGGCCCTCGGCGAGGACAAGGCCAACAACCTGATC GACCGCATCCTCCTCGGCGGCAGCACCAGCGGCCTGGACAGCCTGAAGTGGATGGAGCCGCGTGCCGTGGCCGACGTGATCCGTTACGAACACCCGCAGA TCCAGGCCATCGTGGTCGCCTACCTCGATCCCGACCAGGCCGCCGAGGTGCTCAGCCATTTCGACCACAAGGTGCGCCTGGATATCGTCCTGCGCGTCTC CTCGCTGAACACCGTGCAGCCCTCGGCGCTGAAGGAACTCAACCTGATCCTGGAGAAGCAGTTCGCCGGCAATTCCAACGCCACCCGCACCACCATGGGC GGGGTCAAGCGCGCGGCGGACATTATGAACTACCTCGACAGCTCCATCGAAGGCCAACTGATGGATTCGATCCGCGAGGTCGACGAAGACCTGTCCGGAC AGATCGAGGACCTGATGTTCGTCTTCGACAACCTCGCCGACGTCGACGACCGCGGCATCCAGGCGCTGCTCCGGGAAGTCTCCTCGGACGTACTGGTGCT GGCGCTCAAGGGCTCCGACGAGGCGATCCGCGAGAAGGTCTTCAAGAACATGTCCAAGCGTGCCGCCGAGCTGCTGCGCGACGACCTGGAGGCCAAGGGG CCGGTACGGGTCAGCGAAGTGGAAGGTGCGCAGAAGGAAATCCTCACCATTGCCCGGCGCATGGCCGAGTCCGGCGATATCGTGCTGGGCGGCAAGGGTG GCGAGGAGATGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTGGTCCCCCACGACAAGGACAAAGACAATCCCAGCGAACTGATCCGCGGCAAGGACGTGGCGGCCTTCGGCCTCTGGTCGTTGCCGAGCTTCGACGAG CCGCGCGACGAGCCGGCCGTTGCCGCGCCGCAGGTGCCCGCGGTCGTCGAACCCGCGCCGGCGCCGCCGGCGGTGGAAGAGGTCGAGCTGGAGACCGTCA AGCCGCCGACGCTGGAGGAGATCGAGGCGATCCGCCAGGACGCCTACAACGAAGGCTTCGCCACCGGCGAGCGCGACGGTTTCCACGCCGGCCAGTTGAA GGCGCGGCAGGAAGCCGAGGAGGCGCTGAAGGAGCGTCTGCAAAGTCTCGAGCGTCTGATGACGCAGCTTCTGGAACCCATCGCCGAGCAGGACGCCCTG ATCGAGCAGGGCATGGTCAACCTGGTCAACCACGTTGCCCGCCAAGTGATCCAGCGCGAACTGCACATGGACTCCAGCCATGTCCGCCAGGTCCTGCGCG
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Amino Acid Sequence |
>flagellar motor switch protein FliG
MSENRLAAKLTKVDKAAILLLSLGETDAAQVLRHMGPKEVQRVGVAMASMRNVHREQVEQVMGEFVEVVGDQTSLGVGADGYIRKMLTQALGEDKANNLI DRILLGGSTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAAEVLSHFDHKVRLDIVLRVSSLNTVQPSALKELNLILEKQFAGNSNATRTTMG GVKRAADIMNYLDSSIEGQLMDSIREVDEDLSGQIEDLMFVFDNLADVDDRGIQALLREVSSDVLVLALKGSDEAIREKVFKNMSKRAAELLRDDLEAKG PVRVSEVEGAQKEILTIARRMAESGDIVLGGKGGEEMI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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