Pseudomonas aeruginosa PAO1, PA4410 (ddlB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTCCGGCTTCCAGGGCGTAGGCCGGCGCTTCCAGGTCTACGGCGAGCTGCAGGTCGAGGGTGGCAGCGTGATGCTGGTGGACGATTACGGCCACCATC CGCGCGAAGTCGCCGCGGTGATCAAGGCGATCCGTGGCGGTTGGCCGGAGCGTCGCCTGGTGATGGTCTACCAGCCGCATCGCTATACCCGTACCCGCGA CCTGTACGAAGACTTCGTGCAGGTGCTGGGCGAAGCCAACGTGCTGCTGTTGATGGAGGTCTATCCGGCCGGCGAAGAGCCGATCCCGGGAGCCGACAGC CGCCAGCTGTGCCACAGCATCCGCCAGCGCGGCCAGCTTGACCCGATCTACTTCGAGCGCGACGCCGACCTGGCGCCGCTGGTCAAGCCGCTGCTGCGCG CTGGCGACATCCTGCTTTGCCAGGGCGCTGGCGATGTCGGCGGCCTGGCCCCGCAACTGATCAAGAACCCGCTGTTCGCCGGCAAGGGAGGGAAGGGCGC
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| DNA Sequence for Gene |
>PA4410
|ddlB
ATGAACCTTTGCCTCGATAGCCTGCTGAACGGCACCCAGGATCCCAAGGCGTTCGGCCGTGTCGCCGTGCTGTTCGGCGGCAAGAGCGCCGAGCGCGAGG TGTCGCTGAAGTCCGGCGCGATGGTCCTGCAATCCCTGCTGGCCGCCGGGGTCGATGCCTTCGGCATCGATGTCGGCGAAGACCTGCTGCAACGCCTGGT CGAGGAGAAGATCGACCGTGCCTTCATCATTCTCCACGGTCGTGGCGGCGAGGATGGCAGCATGCAGGGCCTGCTCGAGTGCGCGGGCATTCCCTACACC GGCAGCGGCGTGCTGGCCTCGGCGCTGGCGATGGACAAGCTGCGGACCAAGCGGGTCTGGCTCAGCCTCGGCCTGCCGACCCCGGACTACGCGGTGCTGG CCAGCGAGGATGACTGCCGCGAAGCGGCGCAGCGACTGGGTTTCCCGCTGATCGTCAAGCCGGCTCACGAAGGCTCGAGCATCGGCATGGCCAAGGTCGG CGGGCTCGACGAATTGATCGCGGCGTGGCGCGAAGCGGCCCGCTACGACTCGCAGGTGCTGGTCGAGCAGTGGATCAGCGGCCCGGAATTCACCGTGGCG ACCTTGCGCGGGCAGGTGCTGCCGGCGATCCGCCTGGGCACGCCGCACACCTTCTACGACTACGACGCCAAGTACCTGGCCAGCGATACCCGCTACCAGG TGCCCTGCGGTCTCGACGAGGCCAAGGAACGCGAGCTGAAGGAACTCACCGCGCGCGCCTGCGACGCCCTGGGCATCCAGGGCTGGGGGCGGGCGGACGT GATGCAGGACGCCGAAGGGCGTTTCTGGCTGCTTGAAGTCAACACCGCACCGGGCATGACCGACCACAGCCTGGTGCCTATGGCCGCGCGGGCCGCCGGC CTGGATTTCCAGCAACTGGTGCTGGCGATCCTGGCCGATAGCCGCGAGGCGAGGGGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCATGAATGGCGTACTGCTCCGTCATCAGCAACCCGGTGGACTCGGCCGCGCTCCGCGCAAGCCGATGCCGCGCGGCGCCAGCCGTCTGGTGGCCAAGG AACCGCTGAGCGTGCGCCTGCCGAAAGCCGACTTCAGTTTCCTCAAGTACCTGGCCTGGCCGCTGTTGCTGGCCGTTCTCGGCTATGGCGCCTATCGCGG CGCCGAGTACATCCTGCCGTACGCCGACCGGCCGATCGCCAAGGTCAGTGTCGAGGGCGACCTCAGCTACATCAGCCAGCGCGCGGTGCAGCAGCGGATC TCCCCGTACCTGGCGGCGAGCTTCTTCACCATCGACCTGGCGGGCATGCGCGGGCAACTGGAACAGATGCCCTGGATCGCCCACGCCGAGGTGCGCCGGG TGTGGCCGGACCAGGTGGTGATCCGCCTGGACGAGCAACTGCCGATCGCGCGGTGGGGCGACGAAGCGCTGCTGAACAACCAGGGACAGGCTTTTACGCC
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| Amino Acid Sequence |
>D-alanine--D-alanine ligase
MNLCLDSLLNGTQDPKAFGRVAVLFGGKSAEREVSLKSGAMVLQSLLAAGVDAFGIDVGEDLLQRLVEEKIDRAFIILHGRGGEDGSMQGLLECAGIPYT GSGVLASALAMDKLRTKRVWLSLGLPTPDYAVLASEDDCREAAQRLGFPLIVKPAHEGSSIGMAKVGGLDELIAAWREAARYDSQVLVEQWISGPEFTVA TLRGQVLPAIRLGTPHTFYDYDAKYLASDTRYQVPCGLDEAKERELKELTARACDALGIQGWGRADVMQDAEGRFWLLEVNTAPGMTDHSLVPMAARAAG LDFQQLVLAILADSREARG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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