Strain | Pseudomonas aeruginosa BWHPSA019 genomic scaffold adgfe-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCGACCTCATCGGCGACCACCTGCATGAGACGCTCGGCCTCGCCACCCGGCGGATATTCACGGGGAAACTCCGCCGCCCGCAGCAACAGTTCGCGCAGC AGGCCGGACACCTCCAGTACCCGGCAACCGCCGGGCAGCGAACGATCCAGGTAGAGACTGCGGAACAGCACAGGGTTGCAAGCCTCCGCGGCGTGCCGGA CGCCCGGCGGAATCCACAGCGCCCGCTGCGCCGGCACCAGATAGCTGTGCCGCTCGGTGCTGGCGCGCAAGGTGCCGCTGGCGGCGTACATCAGTTGGCC CCAGGGGTGCTCGTGCATCTCCACCCGGTGCCCGGCGGGCATCTCGAAGGCGCGCAGGTACACCGCGCAGGGCAGGCTGCGGAATCGCGGCAGGTCGCGT TCTTGTCCCGTTTGCGGCATCGGTTGTCCCCATCCGTCGAGTGAGCGGTACGCGGCCGATGGTAGCGTGTGGCTCCCCATAGACAAACCGGAGCCACGCC
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DNA Sequence for Gene |
>Q032_00689
ATGAGCAGTCATCACCCGCAACATCGCCTGTCCGTTCCCGATATCCAGCGCCGCAAGGGTGCCGGCAGCCTGGTGGCGCTGACCGCCTACAGCACGCCCA TGGCCCGCCTCCTCGATCCGCATGCCGACCTGCTGCTGGTCGGCGATTCGCTGGGCATGGTGCTCTATGGCATGCCCAGCACCCTGGGAGTGAGCCTGGA GATGATGGTCGCCCACACCCTGGCGGTGATGCGCGGCAGTCGGCGCGCCTGCGTGGTGGCCGACTTGCCGTTCGCCAGCTACCAGGAATCGCCCCGACAG GCGTTCCGCAACGCCGCACGCCTGCTGGCCGACAGCGGCGCCCAGGCGGTGAAGCTGGAAGGCGGTGAGGAAATGGAAGAAACCGTGGACTTCCTGGTAC GCCGTGGCATACCGGTGCTCGCCCATATCGGCCTGATGCCGCAGCAGGTCAACGCCATGGGCGGCTTCAAGGCCCAGGGGCGTGACCCGGAAAGCGCCGA ACGGGTACGCCGCGACGGCCTCGCCATGCAGCGCGGCGGCGCCTTCGCGGTGGTCATCGAAGGCGTAGGCGAGCCGCTGGCCCGTCGCCTTAGCGAAGAA CTGGCGATCCCCTGCATCGGTATCGGCGCCTCGCCGGCCTGCGACGGCCAGGTACTGGTCAGCGAGGACCTGCTCGGGCTAAGCGGCGAACAGGTACCGC GCTTCGTCGAACGCTACGCGCGCCTCGACCGGGAAATCGACGAGGCGGCCCGGCGCTTCGCCGAGGACGTGCGCGAACGGCGCTTCCCCGAGGCCAAGCA CTGCTTCGCCATGCGCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGCGGTCTCAGGCGAAGACTTCCGCCAGCAGGTCGTCCATCGCCTGGAAGGCACGCCGGGAGGTCCTGGCGTCATAGTGCATCTTGCCCGGCACCTT GGCGTTCGGATCGGTGAAGGAATGCACCGCGCCGCCGTAGCTGGTGAGCTGCCAGTCGACGCCGGCATCGGTCATCTCCCTGGCGAAGGCCGGCAACTGC TCGCGCGGCACCAGCGGATCGGAGGCGCCGTCGAGGACCAGTACCGCGCCCTTGATGTTCCTGGCATGCGCCGGGTCCGGCGTATCCAGGGTGCCATGGA AGGACACGAAGGCCTTCAGCTCGGCGCCGTCGCGAGCCAGCTCCAGCGCGCAGCAACCGCCGAAGCAGAAACCGAAGGCAGCCTGGCGGGTCGTATCGAC AGCCGCGAGCGCCTGTCCGCGCAAGGCCGCCAGCGCTGCCTGCATGCGCTTGCGCAGCAGGGCCCGGTCGTTCTTCAGCGGCATCATCGCCGCGCCCGCC
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Amino Acid Sequence |
>3-methyl-2-oxobutanoate hydroxymethyltransferase 1
MSSHHPQHRLSVPDIQRRKGAGSLVALTAYSTPMARLLDPHADLLLVGDSLGMVLYGMPSTLGVSLEMMVAHTLAVMRGSRRACVVADLPFASYQESPRQ AFRNAARLLADSGAQAVKLEGGEEMEETVDFLVRRGIPVLAHIGLMPQQVNAMGGFKAQGRDPESAERVRRDGLAMQRGGAFAVVIEGVGEPLARRLSEE LAIPCIGIGASPACDGQVLVSEDLLGLSGEQVPRFVERYARLDREIDEAARRFAEDVRERRFPEAKHCFAMRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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