Strain | Pseudomonas aeruginosa BWHPSA020 genomic scaffold adgeC-supercont1.7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAGACCCAGAGCCGCGCGGTGACCAAGCGGGTGCTGGTGGTGGACGATTCGTCGGTGGCGCGCAAGCAGGTAATCCGTTGCCTGGAGGCGGTCGGCGTG GAAATGACCGCGCTCAACGACGGGCGCCAGGCCCTGGAGTACCTGCAGAACATGCTCTCCGAGGGACGGCGTCCGGAAGACGAGCTGCTGATGCTGATCT CCGACATCGAAATGCCGGAAATGGACGGTTATACCCTGACGGCGGAAATCCGTAGCGATCCCCGCCTGCAGAAACTGCACATTCTCTTGCATACTTCGTT GTCCGGGGTCTTCAACCAGGCGATGGTGAAGAAGGTCGGTGCGGACGACTTCCTCGCCAAGTTCCGTCCGGACGATCTGGCGGCGCGGGTGGTGGAGCGG ATCAAGGCGGTGGACGCGGGCTGAGCGATCGGCCCTCGACAACAATGTGAATACGGGCGACCGGCTGCGTTCCGGTCGCCCAGGGCGAAGAGGCTTATGC
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DNA Sequence for Gene |
>Q033_03500
GTGTCGGCAGCTAATGCGGATTTCGAGTTGTTCAGGGTCTTCCTCGAGAAGACCTGCGGCATTGTGCTGGGCAGCAACAAGCAGTACCTGGTCTCAAGCC GGCTGAACAAGCTGATGGAGCAGCAGGGCATCAAGAGCCTGGGAGAGCTGGTGCAGCGCATCCAGACCCAGCGCGGCGGCCTGCGCGAGATGGTGGTGGA CGCGATGACCACCAACGAGACCCTGTGGTTTCGCGATACCTACCCGTTCGAGGTGCTCAAGCAGCGGGTTCTTCCCGAACTGATCAAGGCCAACGGCGGG CAGCGCCTGCGGATCTGGTCGGCGGCCTGTTCGTCAGGCCAGGAGCCGTACTCGCTGTCGATGGCCATCGACGAGTTCGAGAAGACCAACCTGGGGCAGT TGAAGGCGGGCGTGCAGATCGTCGCCACCGACCTGTCGGGGTCGATGCTCACCGCCGCCAAGGCCGGCGAATACGACACCCTGGCGATGGGCCGCGGTCT GTCCCCGGAGCGTCTGCAACGCTATTTCGACGCCAAGGGACCGGGGCGCTGGGCGGTCAAGCCGGCGATCCGCAGCCGCGTCGAGTTCCGTGCCCTGAAC CTGCTGGACAGCTACGCCAGCCTCGGCAAGTTCGACATGGTGTTCTGCCGCAACGTGCTGATCTATTTCTCCGCCGAGGTGAAGCGCGACATCCTGCTGC GCATCCATGGCACGCTCAAGCCTGGCGGCTACCTGTTCCTCGGCGCCTCCGAGGCGTTGAACAACCTGCCCGACCACTACCAGATGGTGCAGTGCAGCCC GGGCATCATCTACCGGGCCAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCAAGGAAGCGGACCCGCGCCAGGTTGCGCCGGGGGTGACCTGGCAGCCTGGCGCGGGTCCGCTTGGGACGGGCAGGTGGGACGAGACTTTCGCCCACT GCCCAGGCTCCGAGCGCCACGCGCGGCGGCGCCGTCGCAGCCCGCTCGGCACAGGACGGCTGGCTCGGAGCGGGGCAGTTTAGGACTGCGCGATCTAGTT GTATTGACAGATATTTCTGATAGTCAGGTGATCTGGCAAGTTGCCGCTTTGCCGGGGAACTGCTTACATGATTCAAGCCTTCCCTCGATCCGCCACGCCT ACCAGGAGACTTCCATGGCCATCACTGCGCTGCCCTCGGCCGATGGGCAAGAGTTGACCATCCAGATCCAGGGGCGCTTCGACTTTGGGGCCCATCAGGA TTTCCGCGACGCCTACGAGCGCGTCGCGATCACTCCGCGACGCTATGTCGTCGATCTGCGCAACGCCACCTACCTGGACAGCTCGGCCCTCGGCATGCTC
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Amino Acid Sequence |
>chemotaxis protein CheR
MSAANADFELFRVFLEKTCGIVLGSNKQYLVSSRLNKLMEQQGIKSLGELVQRIQTQRGGLREMVVDAMTTNETLWFRDTYPFEVLKQRVLPELIKANGG QRLRIWSAACSSGQEPYSLSMAIDEFEKTNLGQLKAGVQIVATDLSGSMLTAAKAGEYDTLAMGRGLSPERLQRYFDAKGPGRWAVKPAIRSRVEFRALN LLDSYASLGKFDMVFCRNVLIYFSAEVKRDILLRIHGTLKPGGYLFLGASEALNNLPDHYQMVQCSPGIIYRAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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