Strain | Pseudomonas aeruginosa BWHPSA020 genomic scaffold adgeC-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCACGCCTGCCAGGCCCTGGAACTGATGCCGGCGGAAATCGAACTGTTCGCCCTGCTGGAAGACCTCCAGGCGCGCGGTATCGAGGACGTCCCCGCTCGC CTGGTGGCGGTGGACTACCCCGGCTTCGTCGAACTCGCCACCCACTTCGACAAGGTCAACAGTTGGCTATGACGCTCCTTATGCTGGAAGGCCGGGAAAT CCGGCTGGACAAGGACGGCTACCTCGCCGCCCTCGACGATTGGTCGGAGCCGGTGGCGGAAGCCCTGGCCGCCCGCGAGGAGCTGGCCCTGACCGCCGAG CACTGGGAGATTCTCCAACTGCTCCGCGAGTTCTATGCGGAGTTCCAGCTGTCTCCGGCCAACCGCCCGCTGATCAAGTACGTCGCCCAGCGACTGGGTC CGGACAAGGGCAACAGCCTGCACCTCAACCACCTGTTCAAGGGCGCCCCGGCCAAGCTTGGCGCGAAGCTGGCCGGCCTGCCGAAACCGAGCAACTGTCT
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DNA Sequence for Gene |
>Q033_01155
ATGACTCTCTCGACTCCCGCCGAACATCCGTTCGCCCAGTTCGTCCGCATCCTCGGCAAAGGCAAGCGCGGAGCGCGCAGCCTGACCCGGGAGGAAGCCC GCGAGGCCCTCGGCATGATCCTCGACGGCAGGGTCGAGGACGCCCAGCTGGGCGCCTTCCTCATGCTCCTGCGGCACAAGGAGGAAAGCAGCGAGGAACT GGCCGGTTTCACCGAGGCGGTGCGCGAGCGCCTGCAAGTCCCGTCCTTGCGCGTCGACCTCGACTGGCCCAGTTACGCCGGCAAGAAGCGCCACCTGCCC TGGTACCTGCTGGCCGCCAAATGCCTGGCCGGCCATGGCGTGCGCATCCTCATGCACGGCGGCGGCGCGCATACCGCCGGACGCCTGTACAGCGAACAGT TGCTGGCGGCGCTGGAGATCCCGCTCTGCCACGACTGGCTGCAGGTAGAACAGGCCCTGGAGCGCGGCCACCTGGCGTTCATTCCGCTCGGCGCCTGGAT GCCGGTGCTGCAACGCATGATCGATCTGCGCAATACCCTCGGCCTGCGCTCGCCGATCCATTCGCTGGTTCGCCTGCTCAACCCCCTGAATGCGGATTGC ATCCTGCAGAGCATCTTCCACCCCGGTTACCAGGAAACCCACCGCGAGGCCAGCCGCCTGCTCGGCGACCGGGCCATCGTCATCAAGGGCGAAGGCGGCG AGATCGAAGTCAACCCGGACGTCGTCGCCCACCTGTATGGTTGCGACCAGGGCGAAGCCTGGGACGAGGAATGGCCAGCATTGTCGACGCACCGGCACAT GAAGCCGGAACAGCTCGACCCGGGTTTCCTTCGGGCCGTCTGGGACGGCCGCGAAGGCGACGCCTATGGCCACCTGGCGGTGCTCTCCAGCATGGCCCTG GCGCTACGGGCCCTTGGCAAGAATCGCGAAGAAGCCTTCAAGGAAGCCGCACACTACTGGGCGACCCGAAACGAATCGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGATACGAATAGCCCTTTATTTATATAAATTTATCGATCACCCGACACTAGACTGTTCCTCCAACGACGTATGGAGGAACCCGCTCATGGGACAGTTGA TCGATGGCCGCTGGCACGACCAGTGGTATGACACACAGAAAGACGGCCGCTTCCAGCGCGAAAACGCCCAGCGCCGCCATTGGCTGGGCGAGCCGGCGTT CCCCGCCGAGAGCGGGCGCTACCATCTCTATGTCTCGCTGGCCTGCCCCTGGGCCCATCGGACCCTGATCGTGCGCAAGCTGAAGGGGCTGGAGTCGCTG GTCGATGTTTCGGTGGTCAGTTGGCTGATGCGCGAGAACGGCTGGACCTTCGACCCCGCCCACGGCTCCACCGGCGATCGCCTCGACGGCCTGGCCTTTC TGCACCAGCGCTACACCCGCGACGACCCGCACTACAGCGGCCGGGTCACGGTGCCGCTGCTGTGGGACAAGCAGGCGCAGAAGATCGTCAACAACGAATC
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Amino Acid Sequence |
>hypothetical protein
MTLSTPAEHPFAQFVRILGKGKRGARSLTREEAREALGMILDGRVEDAQLGAFLMLLRHKEESSEELAGFTEAVRERLQVPSLRVDLDWPSYAGKKRHLP WYLLAAKCLAGHGVRILMHGGGAHTAGRLYSEQLLAALEIPLCHDWLQVEQALERGHLAFIPLGAWMPVLQRMIDLRNTLGLRSPIHSLVRLLNPLNADC ILQSIFHPGYQETHREASRLLGDRAIVIKGEGGEIEVNPDVVAHLYGCDQGEAWDEEWPALSTHRHMKPEQLDPGFLRAVWDGREGDAYGHLAVLSSMAL ALRALGKNREEAFKEAAHYWATRNESI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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