Strain | Pseudomonas aeruginosa BWHPSA020 genomic scaffold adgeC-supercont1.18, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCGGCCCGATGCTGCTCAAGGTGAGCACGCCGATTTCCGCCGCGGACACCGGCGGCAGCCTGCACGACCGGCTCGCCGCGCTCGGCCCGAAAGCGGTGG TCGAAGCCATCGCCGGCCTGGCCGCCGGCACCCTGCATGGCGAGATCCAGGACGACGCCCTGGCCACCTACGCGCACAAGCTGAACAAGGACGAGGCACG CCTCGACTGGAGCCGTCCGGCCGTCGAACTGGAGCGCCAGGTCCGCGCCTTCACCCCCTGGCCGGTCTGCCACACCAGCCTCGCCGATGCGCCGCTGAAA GTCCTCGGCGCCAGCCTGGGGCAGGGCAGCGGGGCGCCCGGAACCATCCTCGAGGCCAGCCGCGACGGCCTGCTGGTCGCCTGCGGCGAAGGCGCCCTGC GCCTGACCCGCCTGCAATTGCCTGGCGGCAAGCCACTGGCCTTCGCCGACCTCTACAACAGCCGCCGCGAGCAATTCGCCGCCGGCCAGGTGCTCGGCCA
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DNA Sequence for Gene |
>Q033_05898
ATGAACCCGCGTCTCGCCGCCTGCCAGGCGCTGGCCGCGGTGCTCGCCGGACGCGCCTCGCTGTCTGGCGCGTTGCCGCCGCAACTGGACAAGGTCGCCC CGCGCGATCGCGGCCTGACCCAGGAGCTGGCCTTCGGCGCGGCGCGCTGGCAACCGCGCCTGCAGGCCCTGGCCGCGCGCCTGTTGCAGAAGCCGTTCAA GGCCGCCGACACCGATATCCACGCCCTGCTGCTGATCGGCCTCTACCAGTTGCTCTACACGCGGATTCCGCCGCACGCCGCGATCGGCGAGACCGTCGGC TGCGCCGACAAGCTGAAGAAGGGCTGGGCCAAGGGCGTGCTCAACGCCGTGCTGCGCCGCGCGCAGCGCGAAGGCGAGACGCTGCTGGCCGAGGTCGACC GCGATCCCTCAGCGCGCCTGGGACATCCGCGCTGGCTGCTGAAAGCGCTCAAGCAGGCCTGGCCGGAGCAGCTCGACGCGCTCTGCGCAGCAAACAACGC ACACCCGCCGATGACCTTGCGGGTCAATCGGCGCCACGGCGAGCGCGATGCCTACCTGGCCGAACTCGCCGAAGCCGGAATCAAGGCCCGCGCCTGCGAC TACAGCCGCGACGGCATCCAGCTCGCCGCGCCGCGCGACGTGCGCGAACTACCGGGCTTCGCGGAGGGTCGCGTCAGCGTCCAGGACGAAGCCGCGCAAC TGGCCGCCGAGCAGCTCGAAAGCGCGCCCGGCCAGCGTGTCCTCGACGCCTGCTGTGCGCCTGGCGGCAAGACCTGCCACCTGCTGGAAACCCAGCCGGA ACTGGCCGAAGTGGTCGCCGTCGACCTCGAGGAGAGCCGCCTGGTAAGGGTCCGGGAAAACCTCCAGCGGCTCGGCCTGCAAGCCAGCCTGGTCGCCGCC GACGCCAGGGCCACCGGGGAGTGGTGGGACGGCAAGCCGTTCCAGCGCATCCTCCTCGACGCGCCGTGCTCGGCCACCGGGGTGATCCGCCGCCACCCGG ACATCAAGCTGGCGCGCAAGCCGGAAGACATCGCCGCCCTGGCGCACCTGCAGGGTGAATTGCTCGACGCGCTGTGGCCTACCCTGGAAGTCGGTGGCGT ATTGCTCTACGCCACCTGTTCGGTGATGCCGGCGGAAAACAGCGACAGCATCGCCGCCTTCCTCGCCCGCACGCCCGGCGCCCGCGAACTGGACCTTCCC GGCCCCTGGGGCATGAAACAGCCCCACGGCCGCCAGTTGCTGCCGCAGGTGGAGGGCCACGATGGCTTCTACTATGCCAAGCTGATCAAGATATCCGCCC GTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGAAACCTGACGAGCCGTTTCCTGCCATGAAAATCATCATCCTCGGTGCCGGCCAGGTCGGCGGCACACTGGCCGAGCACCTGGCCAGCGAAGCCAACG ACATCACCGTGGTCGACACCGACGGCGACCGCCTGCGCGACCTCGGCGACCGCCTCGACATCCGCACCGTGCAAGGCAAGGCCTCGTTCCCCACGGTGCT GCGCCAGGCCGGCGCCGACGACGCCGACATGCTGGTGGCGGTGACCAATAGCGACGAGACCAACATGGTCGCCTGCCAGGTCGCCTACACCCTGTTCAAC ACCCCGACCAAGATCGCCCGCGTCCGCGAGCCGGCCTACCTGACCCGTACCGGGCTGTTCGACAACGAGGCGATCCCGGTGGACGTGCTGATCAGCCCGG AGCAGGTGGTCACCAACTACATCAAGCGCCTGATCGAACACCCCGGCGCGCTGCAAGTCATCGACTTCGCCGAGGGCAAGGCGCAGTTGGTCGGGATCAA
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Amino Acid Sequence |
>16S rRNA methyltransferase
MNPRLAACQALAAVLAGRASLSGALPPQLDKVAPRDRGLTQELAFGAARWQPRLQALAARLLQKPFKAADTDIHALLLIGLYQLLYTRIPPHAAIGETVG CADKLKKGWAKGVLNAVLRRAQREGETLLAEVDRDPSARLGHPRWLLKALKQAWPEQLDALCAANNAHPPMTLRVNRRHGERDAYLAELAEAGIKARACD YSRDGIQLAAPRDVRELPGFAEGRVSVQDEAAQLAAEQLESAPGQRVLDACCAPGGKTCHLLETQPELAEVVAVDLEESRLVRVRENLQRLGLQASLVAA DARATGEWWDGKPFQRILLDAPCSATGVIRRHPDIKLARKPEDIAALAHLQGELLDALWPTLEVGGVLLYATCSVMPAENSDSIAAFLARTPGARELDLP GPWGMKQPHGRQLLPQVEGHDGFYYAKLIKISAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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