Strain | Pseudomonas aeruginosa BWHPSA020 genomic scaffold adgeC-supercont1.13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGGCGCCTTCCTGCCCAGCGCCGAGGCCCTGCAGGCCTACCGCGTGCTGGCGCCGCAGGCCTACCCGGAGATCAAGAAGACCATCGAGCAGGTGGTCG CCAGCGGCCTGATCTACCTGCCCTCCGGCGTTCGCGACCTGCACAATCCGCAGCTCGACAAGTACCTCTCCACCTATTGCCGCGGCTCCGGCGGCATGGG CCACCGGGAGCGGATCAAGATCCTCAAGCTGCTCTGGGACGCCATCGGCAGCGAGTTCGGCGGCCGCCACGAGCTGTACGAGATCAACTACGCCGGCAGC CAGGACGAGATCCGCATGCAGGCCCTGCGCCAGGCGATCGGCAGCGGGGCGATGAAGGGCATGCTCGGCATGGTCGAGCAGTGCATGGGCGACTACGACG AGAACGGCTGGACCGTGCCGCACCTGCACAACCCGGACGACATCAACGTGCTCGATCGCATCCGCCAATGACGCCCGCGTCGCCTCCGGAGGTTATCCCC
|
|
DNA Sequence for Gene |
>Q033_05497
ATGTCCCAGCTCGAACCCAGGCAGCAAGCCTTCCGCAACGCCATGGCGCATCTTTCGGCGGCGGTCAACGTGATCACCAGCAACGGCCCGGCCGGACGCT GCGGGATCACCGCCACCGCGGTCTGCTCGGTCACCGACAGCCCGCCGACGCTGATGCTCTGCATCAACCGCAACAGCGAGATGAACACGGTGTTCAAGGC CAACGGTCGACTCTGCGTGAACGTCCTCAGCGGCGAACACGAAGAGGTGGCCCGCCACTTCGCCGGCATGACCGAGGTCCCGATGGAACGCCGCTTCGCC CTCCACGACTGGCGCGAGGGCCTCGCCGGGTTGCCGGTGCTGCACGGCGCCCTGGCTAACCTGCAGGGACGCATCGCCGAGGTCCAGGAGATCGGCACCC ACTCGGTGCTGTTGCTGGAACTGGAGGACATCCAGGTCCTCGAACAGGGCGACGGCCTGGTCTACTTCAGCCGCAGCTTCCATCGCCTGCAGCGAGCCTG CCGAGCCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCCCTCTCTCCGGAGCCGCCCCACAGGCGGCGTCCGGCCCTCCTCAGCCCTGCACCAGGGCGAAAAGCTGGCTGCGAAAATGGATGTCCAGGCGGGCAAA GGCGCGGTTGCGGTAGGTTTTCACCGTGCTTTCCTTGAGCCCCAGCTCGGCGGCGATACCGGCATGGCTCAACCCGCGCAGCAGGTGCAGGCAGACCGCC AGCTCCTGGGGTGTCAGGTCCGTCGCCCGGTGCAACAGCGCCAGCCGCCACTCGTCGGTCGCGCTGCGTCCCCGGCGCAAGGCCAGGTGCCCCCTCAGCA GTTGCAGCAGGGCCGGCACCCACTGCTCGAAGGCGGCGATCTCGCGCTCGCTGAAATAGCCGTCCTCGCGGTGCCGGTAGAGATTGAACAGCAGCGGCCG GCCTTCCTCGTCCCAATGCAGGCTCGACAGCCGCTCGCTCAGGCCATTGTCCCGATAGATCGCCTCGCGGTAAGCATCGAACTCGATGTCCTCGGCCAGC
|
|
Amino Acid Sequence |
>MFS transporter
MSQLEPRQQAFRNAMAHLSAAVNVITSNGPAGRCGITATAVCSVTDSPPTLMLCINRNSEMNTVFKANGRLCVNVLSGEHEEVARHFAGMTEVPMERRFA LHDWREGLAGLPVLHGALANLQGRIAEVQEIGTHSVLLLELEDIQVLEQGDGLVYFSRSFHRLQRACRAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|