Pseudomonas aeruginosa BWHPSA020, Q033_00329

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BWHPSA020 genomic scaffold adgeC-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCGATCCGGCGCGGCAGCATTCCTTCATCGTCACCGAGGAACTGGCGCCGACCGTGGACCTCGAGGTGTTCTCCCAGGACTGGCGCGAACGTCCTCCAC CGCCGCGGCTCAAGCGCGCGCTGGTCGAGGCGGTGGCGCGGATGGTCGGCGACATGCACCGTGCCGGAGTCAACCATCGCGACTGCTACATCTGTCATTT CCTGTTGCACACCGACAAGCCGGTGAGCGCGGACGATTTCCGCCTCTCGGTGATCGACCTGCACCGTGCCCAGACCCGCGACGCCACGCCGAAACGCTGG CGTAACAAGGATCTGGCGGCATTGTATTTCTCTGCGCTGGACATCGGACTGACGCGTCGCGACAAGCTACGCTTCCTGCGCACCTATTTCCGCCGGCCGT TGCGCGAGATACTGCGCGACGAGGCCGGCCTGCTGGCCTGGATGGAACGCAAGGCGGAAAAACTCTACGAACGCAAGCAGCGTTACGGAGACCTGCTCTG
DNA Sequence for Gene
>Q033_00329
ATGGCGGGGTGGACCCTCGAACCCGATTACCGTCACCTGGCCGCCGACTTCGGTAGCCTCGATAGCGTGTTCGCCCTGGAGGGCGAGCGCCTGACCCGCG ACCCGTTGTCCGAAGTCATCCGCATCGAGCGCGACGGCGTGCGTTACTACGTCAAGCGCTACCGCAGCGCCGGCAAGGGCCTGCGCCGCTACCTGGCGCG ACCGCGGATCAAGGCCGAGTGGCAGAACCTCAAGCGCTTCGAGAAGTGGGGCATTCCCACCGCCGAAGTGGTCGCCTGGGGGCTGGAGCGCAAGGCCGGC GCCTTCCAGCGCGGCGCCATGATCACCCGCGAGCTGCCGGGCACCGAGGACTTGTCGGTGCTCGCCTGCAACCGGGATCCGCGCCTGAAGGACCCGCGCT GGGTGGACGGCGTCAGCCGGCAGATCGCCAAGGCTACGCGCCTGATGCATGACCAGCATTTCACCCATAACGACCTGAAGTGGCGCAACCTGCTGGTGGA CGACCAGCCGCTGGTGTATTTCATCGACTGCCCGAACGGCGCGTTCTGGTGGAGCTTCATGCTGCGCTATCGGATCACCAAGGACCTGGCCTGCCTGGAC AAGGTGGCCAAGTACCACCTGTCGCGCACCCAGCGCCTGCGCTTCTACCTGCAATATCGCCGTCGCCGGCACCTGAACGAATCCGACAAGAAGCGTATTC GCCAGGTGGTGGCTTTCTTCGAGGGGCGCGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGTTTTCATCGCCGCGCAGGACCACGACCTGCTCCAGCGCAACCGTCTGGACAGCTTCGACGCCCTGTGGGCCTTGCAGCTGGACGCCGTGGACGAACC GAATACCGAGCGGGGTGGCTGGAGCAGCGTCTACCGCCTCGACCTGGGCGACTCCGCCTACTACCTGAAGCGCCAGAGCAACCACCTGACCCGCAGCCTG CGCCATCCGCTGGGCGAGCCGACCTTCGCCCGCGAGTTCCGCAACATCGAGCGCTACCGGGCGCTGGGCATTCCCGCCCTGCAGGCGGCGTTCTTCGCCC AGCAGGCGGTCGGCGGAGAGCGCCAGGCGATCCTCCTGACCCGTGCCCTGGACGGTTGGCAGGACCTGGACACCTGGCTGGCGTCCTGGCACGACCTGGC CGAAGAGCGGCGCCGGGCGATTCTCCGGGCGGTTGGCAGGCTGGCGCGCCAGCTGCACGCCGCCGGACAGATGCATGGTTGCTTCTATCCCAAGCATCTA
Amino Acid Sequence
>putative lipopolysaccharide core biosynthesis protein
MAGWTLEPDYRHLAADFGSLDSVFALEGERLTRDPLSEVIRIERDGVRYYVKRYRSAGKGLRRYLARPRIKAEWQNLKRFEKWGIPTAEVVAWGLERKAG AFQRGAMITRELPGTEDLSVLACNRDPRLKDPRWVDGVSRQIAKATRLMHDQHFTHNDLKWRNLLVDDQPLVYFIDCPNGAFWWSFMLRYRITKDLACLD KVAKYHLSRTQRLRFYLQYRRRRHLNESDKKRIRQVVAFFEGRE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site