Pseudomonas aeruginosa PAO1, PA4248 (rplF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATACCCGGCTCCCCTGAGCCTGGGTTTGTTTCGCCTGGCGTTTATGGGCGAATTGAAGTTGAAGGCTTATTCTTTTGTATCAGGAGCGTTAAGCCCATGA GTATGCAGGACCCGTTAGCAGACATGCTAACTCGCATCCGTAATGCCCAGATGGCTGAAAAGACCGTCGTAAGCATGCCGTCCTCGAAACTGAAAGCGGC GGTAGCCAAAGTCCTGAAGGACGAAGGCTATATTGCGGATTTCCAGATCAGCTCGGAAGTAAAACCCCAGCTGTCCATCGAACTGAAGTACTTCGAAGGC AAGCCTGTCATCGAAGAGGTCAAGCGCATCAGCCGTCCTGGCCTGCGTCAGTACAAATCCGTTGAGCAACTGCCGAAAGTTCGTGGCGGCCTCGGTGTGT CGATCGTCTCCACCAACAAAGGTGTGATGACCGATCGTGCTGCCCGTGCTGCTGGTGTTGGCGGCGAAGTGCTCTGCACTGTGTTCTAAGGGGAATCAGC
|
|
| DNA Sequence for Gene |
>PA4248
|rplF
ATGTCTCGCGTTGCTAAGAACCCCGTCAAGCTGCCTGCCGGCGTTGAAATCAAACTGGCTGGTCAGCAACTGTCCATCAAGGGCGCCAAAGGTGCTCTGG AGCTCAAGGTCCATCCTTCGGTCGAAGTGATCCAGGACAGCGGTGAGCTGCGTTTTGCTGCGCGTAACGGCGACCAGCAGACTCGCGCCATGGCTGGTAC CACCCGTGCTCTGGTGAACAACATGGTAGTCGGCGTCAGCCAGGGCTTCGAGCGCAAGCTCCAGCTGGTCGGCGTTGGTTACAAAGCGCAGGCCAAGGGC CAAGTGCTGTCCCTGTCCCTCGGCTTCTCCCATCCGGTTGATTACGAACTGCCGGCCGGCATCGTCGCTGAGACCCCCAGCCAGACCGATATCCTGATCA AGGGTATCGACAAGCAGCTGGTCGGTCAGGTTGCTGCCGAAATTCGCGACTTCCGTCCGCCGGAGCCTTACAAAGGCAAGGGCGTGCGTTACGCCGACGA AGTCGTCCGTCGTAAAGAAGCCAAGAAGAAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCATAGCAAATGAGCGTCAAGAAAGAAACCCGTCTGCGTCGCGCTCGCAAGGCACGCCTGAAGATGCGCGAGCTGGAAACCGTACGCCTCTGCGTGTAC CGCTCTTCCCAGCACATTTACGCCCAGGTCATTGCGGCCGACGGCGGCAAGGTCCTGGCCAGCGCCTCGACCCTGGACAAAGACCTGCGCGAAGGTGCCA CCGGCAACATCGATGCAGCCAAGAAAGTTGGTCAACTGGTCGCCGAGCGCGCCAAAGCGGCCGGCGTCACCCAGGTGGCGTTCGATCGTTCTGGCTTCAA GTACCACGGCCGTGTGAAAGCGCTGGCTGATGCCGCTCGTGAAGGCGGACTGGAGTTCTAAGTTATGGCAAACAACGAGCAAAAGCGCGACGAAGGCTAC ATCGAGAAGCTGGTTCAGGTTAACCGCGTCGCCAAAACCGTAAAAGGTGGCCGTATCTTCGCTTTCACCGCACTGACCGTGGTGGGTGATGGCAAGGGTC
|
|
| Amino Acid Sequence |
>50S ribosomal protein L6
MSRVAKNPVKLPAGVEIKLAGQQLSIKGAKGALELKVHPSVEVIQDSGELRFAARNGDQQTRAMAGTTRALVNNMVVGVSQGFERKLQLVGVGYKAQAKG QVLSLSLGFSHPVDYELPAGIVAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|