Strain | Pseudomonas aeruginosa BWHPSA023 genomic scaffold adgeL-supercont1.6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACCGATCTTGAAAAGGTCGAACACACTGATAGCCATGCCGGCCTCCGGGATTGCCGCGGCATCCGTGCCTGCGTAGTGGGGGTGGCGGCTCCTCCGCCC GCGATTCCTGCGCATCATCGGGCTTTCCCCGGGGCGGGCCGCATCCGCCACCGACCCGGCCATGTCCAAAAGCGCCGCGCCCGCGCCCGGATCGGGGAAC CTCTGCGGCCGAGGGGCGTCTGCACCTGCACGGCGTCGGAATGAGAACGGGCTCGCGCCGCTCCGAAAACGGCATCCGCTGGTCGCCGGCAAAGACCACT ATGATTGAATGCGACACAGCGGGTACTGAATGCGACCCCGCCTGCACTGGTTGCGACCCACCCTGTAGGCGACGGATGCGTCCTGTTTCATGATCGTTCA CGAATTGCCCGCTGAGGGCCGCTACCGGTCGGCCCGATACAGACAGACCGCCGCGCCCTTCGGGGTAGCGCCGGCGCCTTACCCTGCAGAGGAGTTCGCT
|
|
DNA Sequence for Gene |
>Q036_06076
ATGAAAGGTTGCAAGTCTTGGCTGCTGGCCGTGTCTCTGTGCGCACCGCTGGCAGCCCAGGCCGCGGAGCCCGAATCCTGTGCGTCGGTGCGTTTCGCCG ACGTCGGCTGGACCGACATCACAGTGACCACTGCGGTCACCCGCCAGGTCCTCGAGTCCCTCGGCTACAAGACCAAGGTCAATCTGCTCTCGGTGCCGGT GACCTACCGCTCCCTGGCCAACAACGACCTCGACGTATTCCTGGGCAACTGGATGCCCACCATGACCAACGACATCAAGCAGTACGCCGAGAAAGGTACG GTCGAGACACTGCGCGCCAACCTGGAGGGCGCCAAGTACACCCTGGCGGTTCCCCAGTACGTCTACGACGGCGGCCTGCGCAGCTTCGCCGATATCGCGA AGTTCTCCGACAAGCTGGGCAACAAGATCTACGGCATCGAGCCGGGCAACGACGGCAACCGCGTCGCCCAGAGCATGATCGACAAGAACGCCTTCGAACT GGGCAAGTTCAAGTTGGTGGAATCCAGCGAGGCGGGCATGCTCTCGCAGGTGCAGCGGGCCATCCGGCGCAACCAGTGGGTGGTGTTCCTCGGCTGGGAG CCGCACCCCATGAATACCCGCTTCCAGATGAAGTACCTGGAAGGCGGCGACGACTTCTTCGGCCCCAACTATGGCGGCGCGACCATCTACACCAACGTGC GCAAGGGCTACGCCCAGGAGTGCGCCAACGTCGGCCAACTGCTGAAGAACCTCAGCTTCACCCTCGAGATGGAGAACAAGCTGATGGACGCGGTACTCAA CGAAAACAAGAAACCCGAGGAAGCCGCTAAGGCCTGGTTGAAGGATCACCCGGAACAGCTGGATGCCTGGCTGGCCGGTGTCACCACGCGCGACGGGCAG CCTGCCGCAGCCGCGGCCAAGCTGGCGTTCGCCAAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGACCGGTCGTTCATTTCCCGCTCTTGATGGACCCTGATTATGTTCCTGACTGATCACAAGCTCCCGCTGGGAGAGCAGATCGCCGGTTTCGTCGACTG GCTGACCCTGCATGGCGCATCGTTCTTCGACAAGATCTCCGACACCCTGGAGTTCCTCATCCATGGCGTCACCAACGGCTTGCTCTGGTTCAACCCGTTG GTGCTGATCGCCTTGCTGGTAGGGCTGGTGCATTTCATCCAGCGCAGCTGGGGGCTGACCGTGTTCGCCCTGGCCTCGTTGCTGCTGATCCTCAACCTGG GCTACTGGCAGGAGACCATGGAAACCCTCGCCCAGGTGATATTCGCCACCCTGGTGTGCATCGCCGTGGGCGTGCCGCTGGGCATCGTCGCCGCGCACAA GCCGTGGTTCTACACCGCGCTGCGGCCGTTGCTGGACCTGATGCAGACGGTACCGACCTTCGTCTACCTGATCCCGACCCTGACCCTGTTCGGTCTCGGC
|
|
Amino Acid Sequence |
>glycine/betaine ABC transporter substrate-binding protein
MKGCKSWLLAVSLCAPLAAQAAEPESCASVRFADVGWTDITVTTAVTRQVLESLGYKTKVNLLSVPVTYRSLANNDLDVFLGNWMPTMTNDIKQYAEKGT VETLRANLEGAKYTLAVPQYVYDGGLRSFADIAKFSDKLGNKIYGIEPGNDGNRVAQSMIDKNAFELGKFKLVESSEAGMLSQVQRAIRRNQWVVFLGWE PHPMNTRFQMKYLEGGDDFFGPNYGGATIYTNVRKGYAQECANVGQLLKNLSFTLEMENKLMDAVLNENKKPEEAAKAWLKDHPEQLDAWLAGVTTRDGQ PAAAAAKLAFAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|