Pseudomonas aeruginosa BWHPSA023, Q036_01790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA023 genomic scaffold adgeL-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGAACAGGCTTGCCGGATTCACCGAATAGACCAGCAGGGAACCGCAGAACAGCCCCAGGCCCAGCAGGCCCAGGCGGCGCAACCAACCGTCGTGGCGG AGCAATACCACCAGCAGGGCGCCGTACAACAGGCAATCGACCCGCGCCACCGAGTCCTTGACCTGCAACGACTGTTCCCAATCCCCCAGCCACCATCCAG CGGCCACGCCCAGCACGACTCCGGCGCCGACATGAATGCCCGCCTGGATCATCGTCACCCTTCCCCCCTCGGAAATGGTCGGACAGTGCAAGCCGCCACT ATGCCCACGGCAAGCTGAACCATCGCTGAACGAATACCAGCAAATGGCCTTCGGCCACTTCGCCGACGCAACTCCTGCAAAACCCGGCGGTCTTCTCCCT GTGACAGGACGCCGCCCCGCACAGAAAAAATCTGCTGCGACCACTTGGGAACTCGCCCGAGAGGCCATACTCTGTCGCGCAAATTCCCATGAGGTGGCTG
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| DNA Sequence for Gene |
>Q036_01790
ATGCGCACCGACGCTCCCGTTCCAGAACATCCCGCTCCACCCAGCTCTCCCGCGTCCCCACAACGCATCCGGCTGATCGATCGGATTACCGCCTACCGCC AGCCCATCGGCCTGGTCTTCACCTTGCTGCTGTTCGGCCTGGCGCTGGTGGCCTGCTACCACCTGCTACGGGAGATCGATCCCGGCGCCCTCCACGATGC CATCGCCGACGTGCCCAGGCCGGCGCTGCTCGGCGCCCTGAGCGCGACCGCCCTCGGCTTCGTCATCCTGCTCGGCTACGAGTGGTCGGCCAGCCGCTTC GCTGGCGTCACGCTGCCCATGCGCAGCCTGGCCACCGGCGGCTTCAGCGCCTTCGCCATCGGCAATGCGGTAGGCCTGTCGCTGCTTTCCGGCGGCTCCG TACGCTACCGACTGTATTCCCGGCATGGCATCGGCGCTGCCGAAATAGCCCGGATGACGCTATTTGCCAGCCTTTCCCTGGGCTGCGCACTGCCGGTGCT GGCGGCACTCGCCGCACTCTGCGACCTCGACGATGCGGCGTCGGCGCTGCACCTGCCCCGCGCCCTGGTCGCCGTCATCGCGATCGCCGTCCTGTCGCTG GCTGTCGGCCTGGTGGCGTTCCTGGCCCGGCACCGCCTGCCGGGAGAACGGCCGTCCCCCGACAGCCTGCTGGTCCGCCTCGGCCGCCGCAGCCTGCGCC TGCCAGGCCTGCGCCTATCGCTGCTGCAACTGCTGATCACCGCCCTCGACGTCGCCGCCGCCGCTACCGTCCTTTATCTGTTGCTGCCGGAAACCCCACC CTTCGCGGCGTTCCTGCTGGTCTACCTGCTCGCCCTGGCCGCCGGCGTGCTCAGCCACGTACCGGGCGGAGTCGGGGTGTTCGAGGCGGTGCTGCTGGCC GCGTTCGCCGGCCAACTGGGCGCCGCGCCGCTGGCCGCGGCCCTGCTCTTGTACCGCTTGATTTATGTGGTACTGCCACTGCTGCTGGCCTGCCTTTTGT TGCTGTTCCTCGAAGCGCGCCGGTTGTGGGTGACGCGCCAGGCGATCCGCGTCGCCTCGGGTTTCGCCGCACCGATCCTGGCGATCCTGGTCTTCCTCTC CGGTGTCGTGCTGCTGTTTTCCGGCGCCACACCGGCGATCGACACCCGCCTGGAGCACCTCGGTTTCCTCATTCCACATCGCCTGATCGATGCTTCGCAC CTGGTCGCCAGCCTGATCGGCGTGCTCTGCCTCCTGCTCGCGCAGGGTTTGCGCCGACGGCTGTCGGCCGCCTGGGCCCTGACCCTGGTGCTGTTGCTGG TGGGCGCCCTGCTTTCGCTGCTGAAAGGCTTCGACTGGGAAGAAGCCAGCCTGCTGAGCCTGACCGCCGCGCTGCTCGCCATGTTCCGCCGCTCCTTCTA CCGTCCCAGCCGGCTGATGGAAGTACCCTTCTCGCCGCTCTACGTAGGCGCCAGCATCTGCGTGGTCGGCGCCTCGGTCTGGCTGCTGCTGTTCGCCAAC CAGGACGTGCATTACAGCAACCAGCTCTGGTGGCAGTTCGCCCTGGACGCCGACGCCCCGCGCGCCCTGCGCGCCGCCCTCGGCAGTTGCCTGCTGCTCC TGGCCCTGGCCCTTGGCTGGCTGCTGCGCGCGGCACCGCCGGCGATCCGCGAGCCGAACGCGGAAGAGCTGCAGCGCGCGGCGCGGATCATCCGCCACTC GGACCAGCCGGATGGCGGCCTGGCCCTGACCGGCGACAAGGCCCTGCTCTTCCATGAGAGCGACGACGCTTTCCTCATGTACGCCCGCCGCGGTCGCAGC ATGATCGCCCTGTACGACCCGATCGGCCCGGCCATGCAGCGCGCCGAACTGATCTGGCAGTTCCGCGACCTGTGCGACCTGCACCATGCCCGCCCGGTGT TCTACCAGGTGCGTGCCGAGAACCTGCCGTTCTACATGGACATCGGCCTGACCGCCCTCAAGCTCGGCGAAGAAGCGCGAGTCGACCTGCTGCGCTTCGA CCTGGAGAACAAGGGCAAGGAAATGAAAGACCTGCGCTACACCTGGAACCGCGGCCAGCGCGACGGCCTGGCCCTGGAGTTCCATGAACCGGGCCAGGCT CCGCTGGACGAGCTGAAGGCGATATCGGACGCCTGGCTGGGCGGCAAGCAGGTGCGCGAGAAAGGCTTCTCCCTGGGCCGCTTCACCCCGGCGTACCTGA ACTTCTTCCGCATCGCCATCGTCCGCCACCAGGGCAAGCCGGTGGCCTTCGCCAACCTGCTGGAAACCGACAGCCGCGAACTGGCGAGCCTCGACCTGAT GCGCGTGCACCCGGAGGCGCCGAAGCTGACCATGGAGTTCCTCATGCTCGGCCTCATCCTCCACTACAAGGCCCAGGGCCACGCGCGCTTCAGCCTCGGC ATGGTGCCGCTGGCCGGGCTCCAGCCAAGGCGCGGCGCGCCGTTGACCCAGCGCCTGGGCGCGCTGGTCTTCCGGCGGGGCGAACAGTTCTACAATTTCC AGGGGCTGCGACGCTTCAAGGACAAGTTCCAGCCCGACTGGGAACCCCGCTACCTGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCCCTGGCCGATAC CGCCGCGCTGATCGCCGGCGGCCTGACTGGATTGGTGAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TATGTCTGTCGTGAAACGTCACTGGCGCCGTTTTCTGGTCGCCGCCCTGGTGCTGATCGTCGGTGCCGCCCTGCTGCTCTGGAGCCGACCGGCGGCCCAG GCGAAACTGGAAGCCCTGGACCTCGACGACGGCGGCCACGCCACCCTTGCCGAACCCGGCGAGAAGCCGCGCTCGCGGGTGGTGGTGATCGCCGCCCCCG AACAGCAACTGAACGACGCCCAGATGCTGAACCTGGCTCACGACAGCGCCGCCCGGGTGATCCAGTACTTCCCCCCGGAAAACAGCGATTGCAGGGCGCA GCAGTCCCGGCTCGAAGCGGTCATTGCCCGCCTCGGCGGCAAGCCGAACCTGGTCGCCGGCATCGGCCCAGGCTCGACCACCGCCTGGCGCTGGCTCGCC AGCCAGGACGACGACAAGGCCAAGGCGCTCTCGGTCGGCTTCGACATTGCCCTGGCCGAGCGCGACTGCGACGCCCCGCTGCCGCACCAGGCGTCGCACG
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| Amino Acid Sequence |
>membrane protein
MRTDAPVPEHPAPPSSPASPQRIRLIDRITAYRQPIGLVFTLLLFGLALVACYHLLREIDPGALHDAIADVPRPALLGALSATALGFVILLGYEWSASRF AGVTLPMRSLATGGFSAFAIGNAVGLSLLSGGSVRYRLYSRHGIGAAEIARMTLFASLSLGCALPVLAALAALCDLDDAASALHLPRALVAVIAIAVLSL AVGLVAFLARHRLPGERPSPDSLLVRLGRRSLRLPGLRLSLLQLLITALDVAAAATVLYLLLPETPPFAAFLLVYLLALAAGVLSHVPGGVGVFEAVLLA AFAGQLGAAPLAAALLLYRLIYVVLPLLLACLLLLFLEARRLWVTRQAIRVASGFAAPILAILVFLSGVVLLFSGATPAIDTRLEHLGFLIPHRLIDASH LVASLIGVLCLLLAQGLRRRLSAAWALTLVLLLVGALLSLLKGFDWEEASLLSLTAALLAMFRRSFYRPSRLMEVPFSPLYVGASICVVGASVWLLLFAN QDVHYSNQLWWQFALDADAPRALRAALGSCLLLLALALGWLLRAAPPAIREPNAEELQRAARIIRHSDQPDGGLALTGDKALLFHESDDAFLMYARRGRS MIALYDPIGPAMQRAELIWQFRDLCDLHHARPVFYQVRAENLPFYMDIGLTALKLGEEARVDLLRFDLENKGKEMKDLRYTWNRGQRDGLALEFHEPGQA PLDELKAISDAWLGGKQVREKGFSLGRFTPAYLNFFRIAIVRHQGKPVAFANLLETDSRELASLDLMRVHPEAPKLTMEFLMLGLILHYKAQGHARFSLG MVPLAGLQPRRGAPLTQRLGALVFRRGEQFYNFQGLRRFKDKFQPDWEPRYLAVPAGLDPLVALADTAALIAGGLTGLVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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