Pseudomonas aeruginosa BWHPSA025, Q038_05229
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA025 genomic scaffold adggk-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGGCCTCGCGCCAGTGCGCGCGCAGCAGGCGATGGGCGAGGCCGTGGAAGGTGCCGACCCACATGCCCGCCGGATTGATCCCGAGCAACTGCTCGATG CGGTGGCGCATCTCCGCCGCCGCCTTGTTGGTGAAGGTCACCGACAGGATGCTGTAGGGCGAGGCGTGCTCGACCTGGATCAGCCAGGCGATCCGGTGCA CCAGCACGCGGGTCTTGCCCGAGCCGGCGCCGGCGAGGACCAGTTGGCGGCCCAGCGGCGCGGCCACGGCCTGGCGCTGCGGGTCGTTGAGGGAGTTCAG CAGGAGGGAGAGGTCGTCGTTCATCGCGGCATTCTACCGGGGCGGGGAAAAGCCGGGCAAACCGGGCCGCCATTCGGCGCAGGCCGGCGCAGCGTCGGGC CTGGCTGCGGAAAAATGCTCTATCCCGGCCTTGGGCAGCCTGCCCCTGCTCGGTTATGCTCCGGCCACTTCAAGGCAAACCACTACAAGAACAAGCGCCT
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| DNA Sequence for Gene |
>Q038_05229
ATGACCGTCCATGTCGAGCCCTTGGCGCTGCCGGGCGGCAGCACCGATGTACTGCGGCTCTACGCCCGCGAAATCGCCATCGAGCGTACCCGGCTCCTTT ATCTCGGCTCGCGCACGCCGACCCTGCTCATGCTGCTCGGCGGCGTGACCAGCGCCTGCCTGGTGTGGGGCAAGGTCAGCAGCTGGCTGCTCGGCGGCTG GCTGGTCTGGCTGGTGTTGCTCGCCGTCCTGCGCCTGCTGCAGGTCGCCGCCTTCCAGCAGGCCGACAGCCGTCGCCAGGCCAGCCGCCACTGGCGGCGG ACCTTCCTGTGCGGCGCCGGCGCCTCGGGCCTGACCCTGGCGTTCGCGGTGATCATGCTGGTCCCGGCCGATGCCTTCCTCCAGCAGGTGCTGGTGTTCG GCCTGGTGGCGGCGGCGATCCTCTCCGCCAGCGTCGCCTATGCGGTGAGCCTGCCGGCCTTCCTCACCTTCGCCTTGCCGGGCCTGCTGCCATCCATCGT TTTCCTGCTGTTGCAGCCGCATAGCCTGTTGCAGGGCTGGGGTGTGCTCGGCCTGATCCTGCTGGTGGCGCTGCTGGTGGTCGCCGGGCAGATCCACCGA CTGGTGCAGGGCGCGCTGCTGCGACGCTTCCAGACCCAGGCGCTGAACCTGCACCTGGAACGCGTCAATGCGGAGGCCGAAGCGCTCAATCGCAAGCTCG CCCAGGAGGTCGGCCAGCGGCGCCTGGTCGAACGCGAGCTGCGCGCCGCCCGCGACGCCTTGCAGCGCCGGGTGGAGGCGCGCACCGAGGAGCTTGGCGC GACCAGCCAGGCGCTCAGCCAGAGCGAGGCGCGCCTGGCCATGGCCCTGGAGGCCAGCGAACTGGGGTTGTGGGACTGGGACCTGGAGAGCGGCCGGGTC CAGCATTCCTATCTCGAGGCGGTCTTCAGCGACGCCGGGGACGGTCCCGAGGACTATCGCAGGCTGATCGAAAGCATCCACCCCGGCGACCTGCCGCGCA TCCGTCGCGCCCTCGCCGAACATCTCAAGGGGCGCAGCGAGCTGTACCGGGTGGAGTACCGCGTGCGCGACCGGGAGGGCGGCTGGCGCTGGCTGGAGGA TCGTGGCCGGGCCATGGCTCGCGACCCGCGGGGACGGGTGACGCGGATGCTCGGCACGCGCAGCGACATCAGCGCGCGCAAGCGCCTGGAAGAGCAGCAG CAACTGGCCGCGACAGTGTTCGAGGCGGCCAGCGAGAGCATCGTGATCCTCGATCCGGCCTACAACCTGCTGGCGGTCAACCAGGCCTTCAGTCGCATCA CCGGCTATCGCCGCGAGGACGTGGTCGGGCGCAACGCCAGCCTGCTGGTGAATACCCCCGAGGCCCAGCGCCACTACCGGCAGATCCGCGCCGAGCTGCG CCAGCACGGGCAGTGGCAGGGCGAACTGGTGGATACGCGGAAGAATGGCGATCCCTATCCCCAATGGCTGCAGCTCAACCTGCTGCGCGACGGCAATGGC GAGGCGACCCACATCGTCGGTTTCTTCACCGATCTCAGTGCCCGCCGCGACGTCGAGGAGCGCCTGCGTCACCTGCTGCACTACGACGAACTGACCGGCC TGGCCAACCGCCGGTTGTTCCGCGAGCGGCTGCACGAGGCGGCCCAGCGGGCGCGCCAGGAGGAGGGCGGGCTGGCCCTGCTGCTGATCGACCTGGACCG CTTCAAGCTGCTCAACGACAGCCTCGGCCACGAGGTCGCCGACCAGTTGCTCAGGGAGATGGCCCAGCGCCTGCGGCGCACCGCGCCGGAAGCCAACACC CTGGCGCGTCTGGCCGGCGACGAGTTCGCCATCCTCCTCGATGGCGGCACCGGCACCGCGGCCCTGTCGCGCCTGGCCGAACGCCTGCTGGTCCAGTTGC GCCAGCCGGTGAGCGTGCTCGGCCACGAGCTGATCCTCGGCGCCTCGCTGGGGATCAGCCTGTTTTCCGAGCAGGCACGGGAAATCTCCGTGCTGATGAG CCAGGCGAACCTGGCGATGCAACATGCCAAGCAACTCGGCGGCAATACCTTCCAGTTCTTCCGTGACAACCTGCAGGACAGCACCCTCGAACGCCTGCGC CTGGAAACCCGGTTGCGCAAGGCGGTCGAGGAGGGCCAACTGGACGTGCATTACCAGCCCAAGCTGTGCCTGGCCAGCGGCTGCGCGGACTCGGTCGAGG CGCTGGTGCGCTGGCACCATCCTGAGGAGGGCATGATCCCGCCGTCGACCTTCATCGGCCTCGCCGAGGAGTGCGGGTTGATCGGCGAGATCGGTGAATT CGTCCTGCGCCGGGCCTGCCTGCAGGCCGCCGAGTGGAGCCAGCGGGGCCTGAACCTGCGGGTCTCGGTGAACCTCTCGGTCCACCAGTTGCGCCAGGGC GACCTGCTCGACGTAGTGCGCTCGGCGCTTGCCGACAGCGGCCTGCCGGCGGCGCAACTGGAGCTGGAGTTGACCGAAAGCCAGTGGCTGGACGCCCTCG ATAGTGTCCTGGCGACCTTCCGCCAGTTGCGCGAGATGGGGGTGAAGCTATCGGTCGACGACTTCGGCACCGGCTATTCCTCGCTCAGCTACCTGAAGCG CCTGCCGCTGGACTACCTGAAGATCGACCAGTCGTTCGTCCGCGACCTGACCCAGAACAGCGAGGATGCGGCGATCATCCGGGCGATCATCGCCATGGCC CACAGCCTCGACCTGAAGGTGGTCGCCGAAGGCGTGGAAACCATCGAACAGCGGGACTTCCTGGTGGCCCAGCGTTGCGACGAGCTGCAGGGCTACCTGA TCGGCCGGCCGTTGCCGGCCCATGCCCTGGAGGAAGGTTTGCGCCAGGCTCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCGATCCGGCGGAGTATGCTGTAGCACTTTCGACTCCCACGAATTAAGGACGATTCATGCGCTCGAAGCCGCTTCTTCCCGCCCTCCTGCTGGTGGGC GCCGGTCTCTCCCCGCTGGCCCAGGCCAGCAGCGACGACTCCTGCTATCCCGATTGGTCGCTGGTCGGCGGCGGTGTCTGCGATACCCTGCCGTTCCTCG CCCCGGGCAACGACACCCGCGCCAACCTGCGCCTGCTGCTGGCCGACGCCGGCCACTGGCGGCTGGTGGAGGCGCCGCCGTCGGAGGAAGAGAAGCTCGA AGGCTACGGCCTGGTACCGTTCGGCCTGTTCCGCCTGCTGCCCGGCGACGGCAGCCAGCCGCCCGCGCTGCCGGCGGCGAGCGAGGCCGAGACACCGCCG CCTGCGCCAGCGCCCTCGCCGCTCGCCGAACTGGCCCGGCAGATGGGCGCCGAAGCGCTACCGGAAAAGATCGCCGGCGCCGAATTCTTCGAGGGCGAGG
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| Amino Acid Sequence |
>diguanylate cyclase
MTVHVEPLALPGGSTDVLRLYAREIAIERTRLLYLGSRTPTLLMLLGGVTSACLVWGKVSSWLLGGWLVWLVLLAVLRLLQVAAFQQADSRRQASRHWRR TFLCGAGASGLTLAFAVIMLVPADAFLQQVLVFGLVAAAILSASVAYAVSLPAFLTFALPGLLPSIVFLLLQPHSLLQGWGVLGLILLVALLVVAGQIHR LVQGALLRRFQTQALNLHLERVNAEAEALNRKLAQEVGQRRLVERELRAARDALQRRVEARTEELGATSQALSQSEARLAMALEASELGLWDWDLESGRV QHSYLEAVFSDAGDGPEDYRRLIESIHPGDLPRIRRALAEHLKGRSELYRVEYRVRDREGGWRWLEDRGRAMARDPRGRVTRMLGTRSDISARKRLEEQQ QLAATVFEAASESIVILDPAYNLLAVNQAFSRITGYRREDVVGRNASLLVNTPEAQRHYRQIRAELRQHGQWQGELVDTRKNGDPYPQWLQLNLLRDGNG EATHIVGFFTDLSARRDVEERLRHLLHYDELTGLANRRLFRERLHEAAQRARQEEGGLALLLIDLDRFKLLNDSLGHEVADQLLREMAQRLRRTAPEANT LARLAGDEFAILLDGGTGTAALSRLAERLLVQLRQPVSVLGHELILGASLGISLFSEQAREISVLMSQANLAMQHAKQLGGNTFQFFRDNLQDSTLERLR LETRLRKAVEEGQLDVHYQPKLCLASGCADSVEALVRWHHPEEGMIPPSTFIGLAEECGLIGEIGEFVLRRACLQAAEWSQRGLNLRVSVNLSVHQLRQG DLLDVVRSALADSGLPAAQLELELTESQWLDALDSVLATFRQLREMGVKLSVDDFGTGYSSLSYLKRLPLDYLKIDQSFVRDLTQNSEDAAIIRAIIAMA HSLDLKVVAEGVETIEQRDFLVAQRCDELQGYLIGRPLPAHALEEGLRQAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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