Strain | Pseudomonas aeruginosa BWHPSA025 genomic scaffold adggk-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAGACCCAGAGCCGCGCGGTGACCAAGCGGGTGCTGGTGGTGGACGATTCGTCGGTGGCGCGCAAGCAGGTAATCCGTTGCCTGGAGGCGGTCGGCGTG GAAATGACCGCGCTCAACGACGGGCGCCAGGCCCTGGAGTACCTGCAGAACATGCTCTCCGAGGGACGGCGTCCGGAAGACGAGCTGCTGATGCTGATCT CCGACATCGAAATGCCGGAAATGGACGGTTATACCCTGACGGCGGAAATCCGTAGCGATCCCCGCCTGCAGAAACTGCACATTCTCTTGCATACTTCGTT GTCCGGGGTCTTCAACCAGGCGATGGTGAAGAAGGTCGGTGCGGACGACTTCCTCGCCAAGTTCCGTCCGGACGATCTGGCGGCGCGGGTGGTGGAGCGG ATCAAGGCGGTGGACGCGGGCTGAGCGATCGGCCCTCGACAACAATGTGAATACGGGCGACCGGCTGCGTTCCGGTCGCCCAGGGCGAAGAGGCTTATGC
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DNA Sequence for Gene |
>Q038_02841
GTGTCGGCAGCTAATGCGGATTTCGAGTTGTTCAGGGTCTTCCTCGAGAAGACCTGCGGCATTGTGCTGGGCAGCAACAAGCAGTACCTGGTCTCGAGCC GGCTGAACAAGCTGATGGAGCAGCAGGGCATCAAGAGCCTGGGAGAGCTGGTGCAGCGCATCCAGACCCAGCGCGGCGGCCTGCGCGAGATGGTGGTGGA CGCGATGACCACCAACGAGACCCTGTGGTTTCGCGATACCTACCCGTTCGAGGTGCTCAAGCAGCGGGTTCTTCCCGAACTGATCAAGGCCAACGGCGGG CAGCGCCTGCGGATCTGGTCGGCGGCCTGTTCGTCAGGCCAGGAGCCATACTCGCTGTCGATGGCCATCGACGAGTTCGAGAAGACCAACCTGGGGCAGT TGAAGGCGGGCGTGCAGATCGTCGCCACCGACCTGTCGGGGTCGATGCTCACCGCCGCCAAGGCCGGCGAATACGACACCCTGGCGATGGGCCGCGGTCT GTCCCCGGAGCGTCTGCAACGCTATTTCGACGCCAAGGGACCGGGGCGCTGGGCGGTCAAGCCGGCGATCCGCAGCCGCGTCGAGTTCCGTGCCCTGAAC CTGCTGGACAGCTACGCCAGCCTCGGCAAGTTCGACATGGTGTTCTGCCGCAACGTGCTGATCTATTTCTCCGCCGAGGTGAAGCGCGACATCCTGCTGC GCATCCATGGCACGCTCAAGCCTGGCGGCTACTTGTTCCTCGGCGCCTCCGAGGCGTTGAACAACCTGCCCGACCACTACCAGATGGTGCAGTGCAGCCC GGGCATCATCTACCGGGCCAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCAAGGAAGCGGACCCGCGCCAGGTTGCGCCGGGGGTGACCTGGCAGCCTGGCGCGGGTCCGCTTGGGACGGGCAGGTGGGACGAGACTTTGGCCCACT GCCCAGGCTCCGAGCGCCACGCGCGGCGGCGCCGTCGCAGCCCGCTCGGCACAGGACGGCTGGCTCGGAGCGGGGCAGTTTAGGACTGCGCGATCTAGTT GTATTGACAGATATTTCTGATAGTCAGGTGATCTGGCAAGTTGCCGCTTTGCCGGGGAACTGCTTACATGATTCAAGCCTTCCCTCGATCCGCCACGCCT ACCAGGAGACTTCCATGGCCATCACTGCGCTGCCCTCGGCCGATGGGCAAGAGTTGACCATCCAGATCCAGGGGCGCTTCGACTTCGGGGCCCATCAGGA TTTCCGCGACGCCTACGAGCGCGTCGCGATCACTCCGCGACGCTATGTCGTCGACCTGCGCAACGCCACTTACCTGGACAGCTCGGCCCTCGGCATGCTC
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Amino Acid Sequence |
>chemotaxis protein CheR
MSAANADFELFRVFLEKTCGIVLGSNKQYLVSSRLNKLMEQQGIKSLGELVQRIQTQRGGLREMVVDAMTTNETLWFRDTYPFEVLKQRVLPELIKANGG QRLRIWSAACSSGQEPYSLSMAIDEFEKTNLGQLKAGVQIVATDLSGSMLTAAKAGEYDTLAMGRGLSPERLQRYFDAKGPGRWAVKPAIRSRVEFRALN LLDSYASLGKFDMVFCRNVLIYFSAEVKRDILLRIHGTLKPGGYLFLGASEALNNLPDHYQMVQCSPGIIYRAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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