Pseudomonas aeruginosa PAO1, PA3907 (tseT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Sequence Data

Strain Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
AACAGGTCATGACCGCGCGGCAATGGACGCAAGTGATGGCGCCGCTGGAGCGTTGGCAGGTCTGGCAGCCCCTGCAGGGCGGCTACCTCGTCTATGACCG GGAAACGGAGCGGACCGCCGATGCTTGAACTGGATGCCGGCCAACTGGATCGCCTGCAGCGGGTCCGCGACGACGAAGTCATCGAGCGGGTCCTGCTGGA GGTACGCCGGGAGGCTCCCGCCTGGCTCGAACGACGCGGCCTGCTGCCCGCCATCCGGCAACTCGGCGAGCTGCGCGCGACGGCGCTGGAACTGGGTATC GAAGAGCCCGGGACGATCGAACGCTTTCTTCTGCACGGCCTGGCCTTCCCCGCTTTCCAGGACACGCCGGCGTTTCTCGCACACATGCGCCGGCCGCTGG CGGACAGCCCGGAACAACGCTTCCAGGACTACGAACGGATCGTCGAGTTTCGCCTGGCCAGCCAGAAATGGCGCGCGTACGAAACCTCGGGGAGACCGGC
DNA Sequence for Gene
>PA3907 |tseT
ATGAGCGGCATAGGCGCGCTTTTCCGACCGCTGCCCCGCATGGGTCCGCGGCTGCCCTTCGAACTACCCGCGCCGCCCCGGCCGCACTTGCCGATGCCGG CGCCGCGCCCGCTGCCGCGACCGGCCCCCGGCGCACTGCCCAGGCCGGTACCGCGTCCGATGCCGGTGCCGCAGACCCTGCCCAGGACCGAGACCGGCAC GCTGAGCCGCGACCGGACCCGGGAAGCCGAGCGCGATTGCAGCAAGAGCCAGGGCCGCGACAAGGACTGCGTGGAGTGCCCGCCGTCCCGGGGCGAAATG GCCATCGCCAATAACGGCAAGGGCCACAGCATGTCGGACCTGTCCGCGCGCTACCAGCAGTGGGTGACCAATTTCCCGTTTCCCCACGAATGGTTCTGGA GCGGCACCTGGTGGGACGGCTTCGACGAGCCGCGCTGCACCCTGCTGGAGGCGAAGGCCAACTACGCCTTCCTGTTCGTCCCGCTGCTCGGCGTGCCCAG GCCCTGGGCACGGGCCAAGGTGAAGTCGGACCTGCTGCAGAAGGCCGAGGTCCACAGCGACAAGGCCCGACCGACCCCGCCGGTGTTCGTCGAATGGCAC TTCCTGCAGCGGATCGTCTACGAGTACTGCGCCGCGGAGTACCTGCGCATGGGACTGGCCAACCTGAAGGCATTCTGGAATCCGATGCCGGGAACGGACG AGCACGACGACTACCAGGAAACCCGCGCGAAGGAACAGGAAGAGATGAAAAGGTTTTGCGAAGAGAACCCGGGGTATTGCGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGACGCCAAGGCTTTCAGGCGCTACATATTCGAGCTGTACTTCGATCCGGCACGGCTCCTCGAACTGGACGACGACCAGCACCTGCAACGGATAGAACG CTTCCTCGATGCCCTCGCGCCCCTCCATCCGGTGCTGGAGAACTGGTATCTGTGCGGCGACTCCCTGCGCGATGCCCTCAGCCACAACGTCACCGAGCAC CGCCAGGATCTCGCCAAGGCCCTGTCGCGTGACCGACGCACCCGGGCGGTGGAACTGGTGCTATGGAACGGCGAGGAGGATCCGCTCAAGGGCGGGTTGT CGCTGGACTACGAGGCCAGCGGCAGGGCCGTCTCGTCCAGGCTCCAGTTGGAAGATGCCGGCAGCCTGCTGCAGGTGTTCGACGCACCGGCGTCCTCCTT CGTCGCGATCTTCCTCGCGGTGCTGGAAATCTGGCCCGAAACGACCTGGGGCATGCTCGCTCCGCATGCGTACTTCGTACACCAGCGGACCTTCCCGGAC
Amino Acid Sequence
>TOX-REase-5 domain-containing effector, TseT
MSGIGALFRPLPRMGPRLPFELPAPPRPHLPMPAPRPLPRPAPGALPRPVPRPMPVPQTLPRTETGTLSRDRTREAERDCSKSQGRDKDCVECPPSRGEM AIANNGKGHSMSDLSARYQQWVTNFPFPHEWFWSGTWWDGFDEPRCTLLEAKANYAFLFVPLLGVPRPWARAKVKSDLLQKAEVHSDKARPTPPVFVEWH FLQRIVYEYCAAEYLRMGLANLKAFWNPMPGTDEHDDYQETRAKEQEEMKRFCEENPGYCA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site