Pseudomonas aeruginosa BWHPSA026, Q039_06210

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BWHPSA026 genomic scaffold adgfP-supercont1.7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCAGCTCCAGGCTCCATACCGCGAACTGCTGCCGGTAGTCGCGGCGGTATTGCTCGCGATTGGCGAACCACTGGCTGGCCGGCAGTCCGGCCAGCTCCT TGAACAGCTCCGCATCCTTCACCGCGACGAAGTCCACGGCGATCGGCGAGTCGTCGTTGGCGCGCGCGGCGACATCCAGGGTCAGCCGCTGCAACTCGAC CCGCGGCGCGAAGAAATACGAGCAGCCGGCCAGCGCCAGGATCGCCAGCGCCAGGGAGAATTTCCGACATATGGTGAAACATCCGTGCTTCATGGGAGTC CAACGAAAATTTTATTTTGCAAATCCATAGACCTGTTCTAGCGTCTTTTGTAGTTCGTCGCCAGTGACGGACCAGAGGGATCGCCAAGGACAGGTTCTGC GCCGTTTTCCCTGTCATGCCTGTGATCCAGCAAGGGACTGCGATGATCAGGGCATCCCCCGATGCATTGCGCCCCCACCATTGCATCGGAGTCAGCCGCC
DNA Sequence for Gene
>Q039_06210
ATGGCCGAGAGTACGCAGCACAAGCTGGACCGGGTGCGCCCGCCGCGCGTGCAGATCACCTACGACGTCGAGATCGGCAACGCCATCGAGAAGAAGGAAC TGCCCCTGGTGGTCGGCATCCTCGCCGACCTCTCCGGCAAGCCGGATACCCCGCCGGCGAAGCTGGTCGAACGGCGTTTCGTCGACATCGACCGCGACAA CTTCAACGAGATCCTCTCCTCCATCTCTCCCCGCGCCACCCTGCAGGTCGACAACACCATCAGCGGCGACGACAGCAAGCTGAACGTCGAGCTGCGCTTC AACCACATAGAGGACTTCGACCCGGTCAACCTGGTGAAGCAGGTGGTCCCGTTGCGTCGCCTGTTCGAGGCGCGCCAGCGCCTGCGCGACCTGCTGACCA AGCTCGACGGCAACGACGACCTCGACCAGTTGCTGCAGGACGTGGTGGCCAACACCGAAGGCCTGCAGGAAATCAAAGCGGCCCGCCCGGAAGCCGAAGC GGCCCCGGCCGGCGACAGCGAACCCCCGGCCGACCAGCCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTCTTCCCGGAGAAGCCGCCATGCCCAAGTCATCCGCCGCCGAACAATCCGGCGAGAGTTCGACCCAGACCCTGTCCCTGCTCGACGAGATCATTGCC AAGGGCCGCATGGCCCACGACGACAGCCAGCAGGACTACGCCCGCGACATGCTCGCGGAATTCGCCACCCAGGTCCTCGACGAGGGCATGGCCGTCGACA AGGACACCGTGGCGATGATCAACGACCGCATCAGCCAGATCGATGCGCTGATCAGCGACCAGCTCAACCAGATCATCCACCACCCCGAGTTGCAGAAGCT GGAAGCCTCCTGGCGTGGCCTGCACCAACTGGTGAGCAACACCGAGACCAGCGCGCGGCTCAAGCTGCGCCTGCTGAACGTCGGCAAGAACGAACTGCAG AACGATCTGGAGAAGGCGGTCGAGTTCGACCAGAGCGCACTGTTCAAGAAGATCTACGAAGAGGAATACGGCACCTTCGGTGGACACCCCTTCAGCCTGC
Amino Acid Sequence
>type VI secretion protein
MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPDTPPAKLVERRFVDIDRDNFNEILSSISPRATLQVDNTISGDDSKLNVELRF NHIEDFDPVNLVKQVVPLRRLFEARQRLRDLLTKLDGNDDLDQLLQDVVANTEGLQEIKAARPEAEAAPAGDSEPPADQPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site