Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCCGACAGGGCATGGATCAACTGCGCCCGCTCGTGCCGGTGCTCGGCGACCACGAAACCCGCCGGGAAGGTCTTGGCCATGACCCCGAGCGGCCGGCCGA CTCGCTGGTAATCGCGTGGGTCGGTACTCCGGGCGGGATCCGCGACTGGTTTGCTGGCGGGCACGGTGCGACTCCTGCGGAACGAAACGTTCATTATAGG GACGCGGCATGGCCGCGGGTTCCCATGCGTACACAGTCGTGCCAGACACGCCGCAGTTGTGCGACCATGTGCGGCAACGGCCGGGAAGCACCGCCAACCC GGCTCCGGCGCTGTAGAACCTCGGTTGCCATCCTCGGCATGGAACGACCCCCGCCGCAACGACTAAGCTGTCGCTGCCTGCGTCACCGCCCCGGCGGCGA CCGTCAGTCCTCGGGACGAATCGTGCTCGGAACAATCGCTTACCGCTAACGGATGCCGCCCCTTGCGCCATCCCGACTGTCTGTATTGGGGACCTCTTCC
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DNA Sequence for Gene |
>PA3831
|pepA
ATGGAATTCCTTGTTAAAAGCGTACGCCCGGAAACCCTGAAAACCGCCACCCTGGTGCTCGCCGTAGGCGAAGGCCGCAAGCTCGGCGCCAGCGCCAAGG CGGTCGACGACGCCACCGGCGGCGCCATCAGCGCAGTGCTCAAGCGTGGCGACCTGGCCGGCAAGGTCGGCCAGACCCTGCTCCTGCAGAGCCTGCCCAA TCTCAAGGCCGAGCGCGTGCTGCTGGTCGGCGCCGGCAAGGAGCGCGAACTGGGCGACCGCCAGTACCGCAAGCTGGCCTCCGCCGTGCTGTCGACCCTC AAGGGCCTGGCCGGCGCCGATGCCGCGCTGGCCCTCGGCGATCTCGCGGTGAAAGGCCGCGATGCCCACGCGAAGGCGCGTCTGCTGGTGGAAACCCTGG CCGATGGCCTGTACGTGTTCGATCGCTACAAGAGCCAGAAAGCCGAGCCGCTGAAACTGAAGAAGCTGACCCTGCTCGCCGACAAGGCCGACAGCGCCGC CGTCGAGCAAGGCAGCAAGGAAGCCCAGGCCATCGCCAATGGCATGGCCCTGACCCGTGATCTCGGCAACCTGCCGCCGAACGTCTGCCATCCGACGTTC CTCGGCGAGCAGGCCAAGGGCCTGGCCAAGGAGTTCAAGGGCCTGAAGGTCGAGGTCCTCGACGAGAAGAAACTGCGCGAGCTGGGCATGGGCTCGTTCC TCGCCGTCGCCCAGGGCAGCGACCAGCCGCCGCGGCTGATCGTCCTGCAATACAACGGCGCGAAGAAGGACCAGGCCCCGCACGTGCTGGTCGGCAAGGG CATCACCTTCGACACCGGCGGCATCAGCCTCAAGCCGGGCCTGGGCATGGACGAGATGAAGTTCGACATGTGCGGCGCCGCCAGCGTCTTCGGCACCTTC CGCGCGGTGCTCGAACTGCAGTTGCCGATCAACCTGGTCGGCCTGCTGGCCTGCGCCGAGAACATGCCCAGCGGCGGAGCCACCCGTCCGGGCGACATCG TCACCACCATGAGCGGGCAGACCGTCGAGATCCTCAACACCGACGCCGAAGGGCGCCTGGTGCTGTGCGATGCACTGACCTACGCCGAGCGCTTCAAGCC GCAGTCGGTGATCGACATCGCCACCCTCACCGGCGCCTGCATCGTCGCCCTGGGCAGCAACACCTCGGGCCTTATGGGCAACAACGAAGCGCTGGTCAGG CAACTGCTCAAGGCCGGCGAGTTCGCCGACGACCGCGCCTGGCAATTGCCGCTGTTCGACGAATACCAGGAACAGCTGGACAGCCCGTTCGCCGACATCG CCAACATCGGCGGGCCGAAGGCCGGCACCATCACCGCCGGCTGCTTCCTCTCGCGCTTCGCCAAGAAATACCACTGGGCGCACCTGGACATCGCCGGCAC CGCCTGGATCAGCGGCGGCAAGGACAAAGGCGCCACCGGCCGCCCGGTTCCGTTGTTGACCCAGTACCTGCTGGAACGGGCCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGGGTCGATTTCTACGTGATCCCCAGCGCCGATCCGTCGGCGCGCCTGCAGGTCGCCTGCCGCCTGGCCGAGAAGGCCTGGCGGCAGGGCATGCAGGT CTACCTGCATTGCGCCGACGAGGCGCAGCGCAGCGAGTTGGACGGCCGCCTGTGGAGCTTCCGCGGCGAGGCCTTCATTCCTCACAGCCTGGCCGAGGAA GACGCCGAGGCGCCCGTCGCCCTGGGCCTGGGCGAGCCCCCGGGGAACCATCGCGACCTGCTGATCAACCTGACCCTCGAGGCCCCCGGCTTCGTCCCGA ACTTTTCGCGGGTGGCCGAACTGGTGGTCGAGGAGCCGGCGATCCGCCAGGCGGCACGGGATAAATTCCGCTTCTACCGGGAGCAGGGCTATCCTCTACA GGACCATCGCCTGCCGCGTATCTGAAGTGCACGACCATGGACAGCCACAAACCGACACAACCCCCGGAGCAGTTGCTCGATGACCTGGAGTCGATCCACG
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Amino Acid Sequence |
>leucine aminopeptidase
MEFLVKSVRPETLKTATLVLAVGEGRKLGASAKAVDDATGGAISAVLKRGDLAGKVGQTLLLQSLPNLKAERVLLVGAGKERELGDRQYRKLASAVLSTL KGLAGADAALALGDLAVKGRDAHAKARLLVETLADGLYVFDRYKSQKAEPLKLKKLTLLADKADSAAVEQGSKEAQAIANGMALTRDLGNLPPNVCHPTF LGEQAKGLAKEFKGLKVEVLDEKKLRELGMGSFLAVAQGSDQPPRLIVLQYNGAKKDQAPHVLVGKGITFDTGGISLKPGLGMDEMKFDMCGAASVFGTF RAVLELQLPINLVGLLACAENMPSGGATRPGDIVTTMSGQTVEILNTDAEGRLVLCDALTYAERFKPQSVIDIATLTGACIVALGSNTSGLMGNNEALVR QLLKAGEFADDRAWQLPLFDEYQEQLDSPFADIANIGGPKAGTITAGCFLSRFAKKYHWAHLDIAGTAWISGGKDKGATGRPVPLLTQYLLERAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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