Pseudomonas aeruginosa BWHPSA028, Q041_03337
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA028 genomic scaffold adgfi-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGGAGCAGAGCTTTGGCGTCCATGTCGGGGGTTCGCTGGGGATGGAAAGGGCATCATGGCTGAGGTGGCTTTATTCGTCGAACGATGGCTGGCCCTGC CGGTATATCGGCCAGGACTTCATGCGCTGCGGAAATGGCCTAACCAGGTGCAGCGGCTTGCAATCAAAAACGCTGGACTCGCAATCAGCGTGGTTTTGTC CGGAAGCTCGCGAAGGGGCGGCATGGATGAATTTTGAAAGTGGGAGTTCGTTAATGAACTGAAGGTATGCGGCTTCCGTGACTGGCCGGGGTAGATGAGG TGTGCGTTCAGGAAATGACCGTTTGACGCAGGCGCGATTATAAGAGGCGAGAGAGCGCACCTTCTGGATCATCTAAACACGGGATATTGAAGTTGATTGC AGTGTATTGCCGATGCATTGGGGCTTATTGACTGGGAGAGGGTTCTCTAGGTGGGGGTCGCTCAATACATTACACTTTCAAATTAATGTAGGGGCGATCT
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| DNA Sequence for Gene |
>Q041_03337
ATGGCTGTCAATGATTACGAACCTGGTTCGATGGTTATTACACATGTGCAGGGTGGTGGGCGTGACATAATCCAGTATATTCCTGCTCGATCAAGCTACG GTACTCCACCATTTGTCCCACCAGGACCAAGTCCGTATGTCGGTACTGGAATGCAGGAGTACAGGAAGCTAAGAAGTACGCTTGATAAGTCCCATTCAGA ACTCAAGAAAAACCTGAAAAATGAAACCCTGAAGGAGGTTGATGAAATCAAGAGTGAAGCGGGGTTGCCAGGTAAAGCGGTCAGTGCCAATGACATCCGC GATGAAAAGAGTATCGTTGATGCACTCATGGATGCCAAAGCAAAATCGCTAAAGGCCATTGAGGATCGCCCGGCCAATCTTTATACGGCTTCAGACTTTC CTCAGAAGTCAGAGTCGATGTACCAGAGTCAGTTGCTGGCCAGCCGAAAATTCTATGGAGAGTTCCTGGATCGCCATATGAGTGAGCTGGCCAAAGCGTA CAGCGCCGATATTTATAAGGCGCAAATCGCTATCTTGAAACAAACGTCTCAAGAGCTGGAGAATAAAGCCCGGTCATTGGAAGCAGAAGCCCAGCGAGCC GCTGCTGAGGTGGAGGCGGACTACAAGGCCAGGAAGGCAAATGTCGAGAAAAAAGTGCAGTCCGAGCTTGACCAGGCTGGGAATGCTTTGCCTCAACTGA CCAATCCAACGCCAGAGCAGTGGCTTGAACGCGCTACTCAACTGGTTACGCAGGCGATCGCCAATAAGAAGAAATTGCAGACTGCAAACAATGCCTTGAT TGCCAAGGCACCCAATGCACTGGAGAAACAAAAGGCAACCTACAACGCCGATCTCCTAGTGGATGAAATCGCCAGCCTGCAAGCACGGCTGGACAAGCTG GACGCCGAAACGGCAAGGCGCAAGGAAATCGCTCGTCAAGCGGCGATCAGGGCTGCCAATACTTATGCCATGCCAGCCAATGGCAGCGTTGTCGCCACCG CCGCAGGCCGGGGTCTGATCCAGGTCGCACAAGGCGCCGCATCCCTTGCTCAAGCGATCTCCGATGCGATTGCCGTCCTGGGCCGGGTCCTGGCTTCAGC ACCCTCGGTGATGGCCGTGGGCTTTGCCAGTCTGACCTACTCCTCCCGGACTGCCGAGCAATGGCAGGACCAAACGCCCGATAGCGTTCGTTACGCCCTG GGCATGGATGCCGCTAAATTGGGGCTTCCCCCAAGCGTAAACCTGAACGCGGTTGCAAAAGCCAGCGGTACCGTCGATCTGCCGATGCGCCTGACCAACG AGGCACGAGGCAACACGACGACCCTTTCGGTGGTCAGCACCGATGGTGTGAGCGTTCCGAAAGCCGTTCCGGTCCGGATGGCGGCCTACAATGCCACGAC AGGCCTGTACGAGGTTACGGTTCCCTCTACGACCGCAGAAGCGCCGCCACTGATCCTGACCTGGACGCCGGCGAGTCCTCCAGGAAACCAGAACCCTTCG AGTACCACTCCGGTCGTACCGAAGCCGGTGCCGGTATATGAGGGAGCGACCCTCACACCGTTGAAGACCGGCCCGGAGTCCTATCCGGGAATGCTACTGG ACCTAAACGATCTGATCGTGATTTTCCCGGCGGATTCTGGAGTCAAACCTGTTTATGTAATGCTCAGTAGTCCTCTTGATAGTGGTATCTTCACACGGAG GCAACTACAGAAAAAATTTGATAGCCACAAATATGATTTTGGGCTGGGTGAAAAAAGCGCCAACAATGGAACGCTTGCAGAGTTTAGGGATAAAATTCTT GAGCACCTTGCCGATCCTGCAACCGTAGAAAAAGGGACTTACCACTCCGAAGTAAACTCAAAAGTACATTACAATGCCAGGACTAATATTGTTGTTATCA TTGGAGAGGATGGGATGTTTGTTTCTGGGTGGAGGATTGAACCTGGCACGGATCAATACAATTTTTACATGAAAAATGAGGTGCTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATGAGCATGGAAATGATAGATATTGCAAAGAGGCTATTAGCCTCATCGATTGACGGGAAAACCTTCAGCGAAGAATTTTTTAAGACTTGGAGGTCCGAG CGCGATTCAGGGGTGCTGGCCCAAGATGATGCATCGCTTGGGAGATGCTTGAGTTTAATGTTTGGTCTGGCCGACAGCTTTACCGAAGGAAAGAAAGAGC GCCCAGGTGAACTTACAGAGGGTGAGCTTAAAATAGCGCTGAGTGATCTATTGAAAGAATATAAATACATATAATAAGCCGAACTTTAGTAGGTGTAGAC AGAGGCCTCTGTGAGGGGCTTCTGTCTTCTCGTAGAGAGTGGCTTCCCGTCTCGAGATGCAGAAGCGCGTCGACTACTAGCAAGATAAACCATAAAAGCC TGGTAGAGCAGTTCGATGCCAGGCCTACGGAGGTTAGTGCGTTGTTCAGCAATACGCTGGACTCGGCGCGAGCGACCGAGTTGCAGGAAAAGATGCAAAG
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| Amino Acid Sequence |
>HNH nuclease
MAVNDYEPGSMVITHVQGGGRDIIQYIPARSSYGTPPFVPPGPSPYVGTGMQEYRKLRSTLDKSHSELKKNLKNETLKEVDEIKSEAGLPGKAVSANDIR DEKSIVDALMDAKAKSLKAIEDRPANLYTASDFPQKSESMYQSQLLASRKFYGEFLDRHMSELAKAYSADIYKAQIAILKQTSQELENKARSLEAEAQRA AAEVEADYKARKANVEKKVQSELDQAGNALPQLTNPTPEQWLERATQLVTQAIANKKKLQTANNALIAKAPNALEKQKATYNADLLVDEIASLQARLDKL DAETARRKEIARQAAIRAANTYAMPANGSVVATAAGRGLIQVAQGAASLAQAISDAIAVLGRVLASAPSVMAVGFASLTYSSRTAEQWQDQTPDSVRYAL GMDAAKLGLPPSVNLNAVAKASGTVDLPMRLTNEARGNTTTLSVVSTDGVSVPKAVPVRMAAYNATTGLYEVTVPSTTAEAPPLILTWTPASPPGNQNPS STTPVVPKPVPVYEGATLTPLKTGPESYPGMLLDLNDLIVIFPADSGVKPVYVMLSSPLDSGIFTRRQLQKKFDSHKYDFGLGEKSANNGTLAEFRDKIL EHLADPATVEKGTYHSEVNSKVHYNARTNIVVIIGEDGMFVSGWRIEPGTDQYNFYMKNEVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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