Strain | Pseudomonas aeruginosa BWHPSA028 genomic scaffold adgfi-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGTGCCTTCGCCCGGCGCAGCGACGACGCCGGCCAGGCCAGCCTGGCCAAGGCGGTGGACGCGGCGCTGCTGATCCTGCACGGGCGCCTGGAGCAGGACC CGCCGACCCTGCACCGGCATTTCGACGACGTGCGCCTGGGCATCGACCAGACCCGCCTGGAGCAGATCCTGGTCAACCTGCTGGCCAACGCCCTCGACGC CATGAGCGGGCAGGCCGACCGCCAGCTCTGGCTGGAAGGCCGGCGCGAGGAGGAGCGCTACGTCCTGCGCGTGCGCGACAACGGCCCCGGTATCCCGCCG GCGGCGCGCGTCCACCTGTTCGAACCCTTCTTCACCACCAAGCCCGGCGAACATGGCCTGGGCCTCGGCCTGACCCTCTCGGCCAGCCTGGCCACCGCCG CCGGCGGCAGCCTCAGCGTGCAGCACCCCGAAAGCGGCGGAACCGCCTTCGAGCTGAGCCTGTCCCTGGTTCCCGATTCCCCGACTGCGAGTCCCGCCCG
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DNA Sequence for Gene |
>Q041_03142
ATGAACGAGCCGCTTTCCGTCCTGATCGTGGAAGACGATCCGCATGTCTTGCTCGGCTGCCAGCAGGCGCTGGAGCTGGAGGACATCCCCTGCATCGGCG TCGGCAGCGCCGAGGAGGCGCTGCAACGGGTCGACCGCGACTTCGCCGGCATCGTCGTCAGCGACATCCGCCTGCCCGGCATCGACGGCCTGACCCTGCT GGAGCGTCTCAAGGCCCTCGACCCGAGCCTGCCGGTGGTGCTGATCACCGGTCACGGCGACATCTCCATGGCGGTACAGGCGATGCACGCCGGCGCCTAC GACTTCATGGAGAAGCCCTTCTCTCCGGAACGCCTGGTCGAGGTCGCCCGCCGCGCCCTGGAGCAGCGCGGGCTGGCCCGCGAGGTCAGCGCGCTGCGTC GCCAGTTGGCCGGCCGCCAGGACCTGGCGCAACGGATCATCGGCCGCTCGCCGGCGATCCAGGCGTTGCGCGAGCTGATCGCCAACGTCGGCGACACCTC GGCCAACGTGCTGATCCTCGGCGAGACCGGCACCGGCAAGGAGCTGGTGGCGCGCTGCCTCCACGACTACAGCCGGCGCCACCAGCATGCCTTCGTCGCG CTGAACTGCGGCGGCCTGCCGGAGAACCTGTTCGACAGCGAGATATTCGGCCACGAGGCGCACGCCTTCACCGGTGCCAACAAGCGGCGGATCGGCAAGA TCGAGCATGCCAACGGCGGCACGCTGTTCCTCGACGAGATCGAGAGCATGCCGGTCAACCTGCAGATCAAGCTGCTGCGGGTGTTGCAGGAACACAGCCT GGAACGCCTCGGCTCGAACCAGTCGATCCCGGTGGACTGCCGGGTGATCGCGGCGACCAAGGCGGACCTCGCCGCCATGGGCAAGAGCGGCCAGTTCCGC AGCGACCTCTACTACCGGCTCAACGTGGTGAGCCTGGAACTGCCGGCACTGCGCGACCGCCGCGAGGACATCCTGCTGCTCTTCGAACACTTCCTCCAGC AATCCTCGCTGCGCTTCGACCGCCCCGCGCCGGAACTCGACCGTGCCACCGTGGCCAGCCTGATGGCCCACGACTGGCCGGGCAACGTGCGCGAACTGCG CAACGTCGCCGAACGCTTCGCCCTCGGCCTGCCGGTGTTCAACAAGGGCGGCCAGGCCGTACAGACCGGCGGCCCGCGCTTCGCCGAAGCGGTGGAGGCA TTCGAGAAGGCCCTGCTCGGCGACGCCCTGGCCCGCCACCACGGCAACCTGACCCAGGCCAGCCAGGACCTGGGCATGGCCAAGACCACGCTGTTCGACA AGGTGAAGAAGTACGGCCTGCAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGAGCGCCCTCTTCGCCCTGCCCGCCTGGCGTGGGGCGCAGGACGCGATGCTTCATCCGGCATTTCTCACCCGCCTGCGTTTCCGCTCGGTGGATAA CGCCGGGGGCGTTATTCGCCCTACCCGCCTGACGCAGCGCGTCATAGGCCATTCCTCCTCCCTCGGTGCGCCCTACGCGCCGGTGTGGGGAACGCGCTAT CCGGGAATTCATGAATTGAACTCAAGTGTCATTTTCCCCGGCAGCGGTTTTTCGCACGAATCGTTCCGCCAATAATGCGCTCACCTTCTTCCAGCGCGCC GCGCCACGGCCGGCCTCACGAGCGATATCGCCATCATGCTGTTCAGCCCCTATGCCCTTGGCCACCTGACCCTCCCCAATCGCATCGTCATGCCGCCGAT GACCCGTTCCCGAGCCGCCAGTGGCGAAGTCGCCACCGCGCTGATGGCCGAGTACTACAGCCAGCGCGCCGGCGCCGGCCTGATCGTTTCCGAAGGCACC
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Amino Acid Sequence |
>Fis family transcriptional regulator
MNEPLSVLIVEDDPHVLLGCQQALELEDIPCIGVGSAEEALQRVDRDFAGIVVSDIRLPGIDGLTLLERLKALDPSLPVVLITGHGDISMAVQAMHAGAY DFMEKPFSPERLVEVARRALEQRGLAREVSALRRQLAGRQDLAQRIIGRSPAIQALRELIANVGDTSANVLILGETGTGKELVARCLHDYSRRHQHAFVA LNCGGLPENLFDSEIFGHEAHAFTGANKRRIGKIEHANGGTLFLDEIESMPVNLQIKLLRVLQEHSLERLGSNQSIPVDCRVIAATKADLAAMGKSGQFR SDLYYRLNVVSLELPALRDRREDILLLFEHFLQQSSLRFDRPAPELDRATVASLMAHDWPGNVRELRNVAERFALGLPVFNKGGQAVQTGGPRFAEAVEA FEKALLGDALARHHGNLTQASQDLGMAKTTLFDKVKKYGLQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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