Strain | Pseudomonas aeruginosa BWHPSA028 genomic scaffold adgfi-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCAACGTCGCTCCACGGAGTCAAGATCCCGGCGCGATGGTCGCCGCGGTTCGCGTCGCGTTGTCCCGCGCAATCGTGCAAAGCATTGTCGGGCTTGAGC CGGAGCTGCCTGTGATCACGCTCGAGCCGAGGTTGGAACAGATTTTGCTGAACAGCATGCAGAAGGCCGGACAAGGCTCCGAGGACGGCATGTTGCTGGA GCCGGGGATGGCCGAGAAGCTGCAACGCTCGCTGATCGAGAGCGCGCAACGCCAGGAGATGCTCGGTAAGCCGGCGATCCTGCTGGTTGCCGGACCGATC CGCTCGATGATGTCGCGCTTCGCGCGGATGGCGGTGCCCAGCATGCATGTGCTGGCCTACCAGGAAATCCCGGACAACAAGCAAGTCACCATCGTCGCGA CGGTGGGACAGAACTGAACGAGGGCTGCGCCGGCTCCAGGGCCGGCACACCGGGCAACCTGAGGTTGCCGGCAAGACTACTGAACTGAGGGGTTCGGGCA
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DNA Sequence for Gene |
>Q041_03038
ATGCAAGTCAAACGCTTCTTCGCCGCCGATATGCGCCAGGCCATGAAACTGGTCCGCGACGAACTGGGTCCGGACGCCGCGATTCTCGGCAACCGCCGGG TCGCCGGCGGCATCGAGCTGACCGCGGCGCTGGATTACCAGGCCCCGCCGGCGCCGAGCAAGCCCAACCCGGCGCTGGAAGTGGAGCTGCGCAAGACCCA GGCGCGGATCGCCGAGGCGCGCGCCGAGTTGACGGCGCGTCCGGCGGAAACCCAGCGCAAGGACCGTCAATTGTTCGCCGAGGAGAAGCCGGCGCGTCCG TCCCTGGCCGAGTCCATGACGGCGGCGCAGGCCAAGCCCCAGGCGGGCGGCCAGACCCTCGAGGCAATGCGTTTCGAACTGAACGGCCTGCGCGAGCTGA TCGAGGTACAACTGGGTTCCATCGCCTGGGGCCAGTTGCAGCACCAGCGTCCGCAGCAGGCCAATCTCTGGCGGCGCCTGCAGCGCATGGGCTTGCCGGC GGAGCTGAGCAAGCCGTTGCTGGAGCGGGTCGCCGCGGTGGGCGATACGCGCCAGGCCTGGCGCATGCTGTTGGCGCACCTGTCGCGTGCCGTGCAGACC CCCGAGCAGGACCCGCTCGACGCGGGCGGCGTACTGGCCCTGGTCGGCCCGGCAGGTGCCGGCAAGACCACCACCCTGGCGAAGATGGCCGCGCGCTACG TCCTCAAGTACGGCGCCCAGAGCCTGGCGCTGGTGAGCATGGACAGCTACCGGATCGGCGCCCAGGAGCAGATCAAGACCCTCGGTCGGATCCTCAACGT ACCGGTGACCCTGGTCGATCCCGGCCAGTCGCTGATCCAGGCCCTGGCGCCGCTGGCGCGCAAGCGCATGGTGCTGATCGATACCGCCGGCCTGCCGGCC AGCGACCCGGCATTGCGCATGCAGCTCGAGGCACTGGCGTCGCCGAGCCTGAACGTGAAGAATTACCTGGTGATGGCCACCACCAGCCAGAGCCAGGTGC TCAAGTCGGCCTACCAGACCTATCGGCACTGCGGGCTGGCGGGTTGCATCCTGACTAAGCTGGACGAGGCGGGCAGCCTCGGTGAATCGATGGCGCTGGC TATCGCCCAGCGTCTCCCGGTAGCCTATCTGGCGGATGGGCCGCGGATTCCGGACGACCTGCAGGTGGCGCGCAGTCACCAACTGGTCAGCCGGGCGGTG AGCCTGCAGGCACCGGAAGAGCCCAGCGAGGACGCCATGGCCGAGATGTTCGCCGGGCTCTACCAGCAACCGGCGCGGCGTGCCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGACGTGGGAAGAACCGCGCGTGGCGCGGGTGACGGAAGCGAAGGTGGCTTCCGCCGGGCCGGGAGCGATGGCGCATCGTTCCCGCCAATACCGGAGAGC GCTGGAAGGGGCGTTCCGGGAAGACGACAACACAAGGTATGAAGCAGATGGGTAGCATGCATCCCGTACAGGTGATCGCAGTAACTGGCGGCAAGGGCGG CGTCGGCAAGACCAATGTGTCGGTGAACCTGGCACTGGCTCTGGCCGATCTCGGCCGTCGCGTCATGCTGCTGGATGCCGACCTCGGCCTGGCCAACGTC GACGTCCTGCTGGGACTCACGCCCAAGCGCACCCTGGCCGACGTGATCGAGGGACGCTGCGAACTGCGCGATGTCCTCCTCCTCGGTCCCGGTGGCGTGC GCATCGTTCCCGCGGCCTCCGGCACGCAGAGCATGGTGCACCTCTCGCCGATGCAGCATGCGGGGCTGATCCAGGCGTTCAGCGATATCAGCGACAACCT
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Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGPDAAILGNRRVAGGIELTAALDYQAPPAPSKPNPALEVELRKTQARIAEARAELTARPAETQRKDRQLFAEEKPARP SLAESMTAAQAKPQAGGQTLEAMRFELNGLRELIEVQLGSIAWGQLQHQRPQQANLWRRLQRMGLPAELSKPLLERVAAVGDTRQAWRMLLAHLSRAVQT PEQDPLDAGGVLALVGPAGAGKTTTLAKMAARYVLKYGAQSLALVSMDSYRIGAQEQIKTLGRILNVPVTLVDPGQSLIQALAPLARKRMVLIDTAGLPA SDPALRMQLEALASPSLNVKNYLVMATTSQSQVLKSAYQTYRHCGLAGCILTKLDEAGSLGESMALAIAQRLPVAYLADGPRIPDDLQVARSHQLVSRAV SLQAPEEPSEDAMAEMFAGLYQQPARRAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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