Strain | Pseudomonas aeruginosa BWHPSA028 genomic scaffold adgfi-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAACTCGCTGGCGCGACTCATGGCGGTGGAGATGGAATCCAGCGCCGGCGACAGGTGGGCGAAGATTTCCTGGGCTCGCGCGGTGGGCTCCATGCTGCG TCCGGTACGGACGAACAGCGGGTCGTCGAACAGCGTGCGCAGGCGCGACAGCGCGGCGCTGATGGCCGGCTGGCCGAGGAACAGTTTCTCTGCGGCGCGG GTCACGCTGCGTTCGTGCATCAGGGTCTCGAACACGATCAGCAGGTTCAGATCGACGCGGCGCAGGTCGTTTCGGTTCATGGCGTTCCTCGTTTCCAGGG GCTAGAGGCTGCAACCGCGGGGGCTCGCCGTCAAGCCTTGCGTGCGAGACGGGGCGGGGCCTGGCGAGGTGCCGGAGGGGCATAGGATCACTGACAGGCA TAGCCATTATCAATAACGACGGGTGGTTTTGTCAGGCATGGGCGGATACAGTCACAACCCATGAGGTTATTCACCCCGTGATGCACTGCAGAGGTTTGCG
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DNA Sequence for Gene |
>Q041_02043
ATGTCCCGAGTGATCCGTTTTCATCAGTTTGGCCCGCCAGAGGTCCTCAAATGCGAAGAGCTGCCGACCCCGGCGCCGGCCGCAGGGGAAGTCCTGGTGC GTGTCCAGGCGATCGGCGTGAGCTGGAAGGATGTGCTCTGGCGTCAGAACCTGGCCCCGGAGCAGGCTGCGCTGCCGTCCGGTCTCGGCTTCGAACTGGC CGGCGAGGTTCTGGCGGTCGGCGCCGGCGTCGGCGACCTGCCGCTGGGTTCCCGCGTGGCCAGTTTCCCCGCCCATACCCCCGATCATTATCCGGCCTAT GGCGACGTGGTGCTGATGCCGCGCGCGGCCCTGGCGGTCTACCCCGAGGTACTCACCCCGGTGGAGGCCAGCGTCTACTACACCGGCCTGCTGGTGGCCT ATTTCGGCCTGGTCGACCTGGCCGGGTTGAAGGCCGGGCAGACCGTGCTGATCACCGAGGCGGCGCGCATGTACGGGCCGGTCTCGATCCAGTTGGCCAA GGCTCTCGGCGCGCGGGTGATCGCTTCCACCAAGTCCGCCGAGGAGCGCGAGTTCCTCCGCGAGCAGGGCGCCGACAAGGTGGTGGTGACCGACGAGCAG GACCTGGTCCTGGAAGTCGAGCGCTTCACCGAGGGCAAGGGCGTCAATGTCATCCTCGACGAATTGGGCGGCCCGCAGATGACCCTGCTCGGCGATGTCT CCGCCACCCGCGGCAAGCTGGTGCTGTATGGCTGCAACGGCGGCAACGAGTCGGCGTTCCCGGCCTGCGCCGCGTTCAAGAAGCACCTGCAGTTCTACCG CCACTGCCTGATGGATTTCACCGGTCATCCGGAGATGGGCCTGGAACGCAACGACGAGTCGGTGAGCAAGGCCCTCGCGCACATCGAGCAACTGACCCGC GATCGCCTGCTCAAGCCGGTGGTCGACCGGGTATTCGAGTTCGACCAGGTGGTCGAGGCGCACCGCTACATGGAAACCTGTCCGAAGCGTGGCCGGGTGG TGATCCACGTCGCCGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGACGACCCGCAGCGAAAGAGCCCGGCCATCGAGCCGGGCTTTTTCGTTGGGGGACAGAGGTCTCTGGGTTCTGGTCGCCAGCGCGTTAGGAGAGCAAAG GGACAGTTCGACTCTTCTTGAAAATATCTGTAATCCGGCTTCAGATCATTTGAAGCCCCAAGCGACCGAGGCTCGCCGCCAGTCGCAGGCGCGAGGTCTG CCAGTTGCCGAGGGCACGGATGTGCTGGTCCTCGGCGCTGGCGTAGGCGGTCAGGGCGTTGAGCAGCTCGATCATGCTGCCGACCCCTGAGCGGTAGCGG CCCTGCACCACCTCCAGGCTTTGCCGCGACTGTTCGACCAGTTCGCGGGTGCGCGCCAGGCTGCGGGTCTCGACGCTGAGCGACTGGTAGTTGTTCCACA CCTCCAGCGAAACCTGCTGCTCGGTGTCGGCCAGCTCCGCTTCGCTGGCTTCGCGGCGGGCCAGGGCGTTGCGGACCTGGTAGGTGCGTTCGAAGCCTTC
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Amino Acid Sequence |
>alcohol dehydrogenase
MSRVIRFHQFGPPEVLKCEELPTPAPAAGEVLVRVQAIGVSWKDVLWRQNLAPEQAALPSGLGFELAGEVLAVGAGVGDLPLGSRVASFPAHTPDHYPAY GDVVLMPRAALAVYPEVLTPVEASVYYTGLLVAYFGLVDLAGLKAGQTVLITEAARMYGPVSIQLAKALGARVIASTKSAEEREFLREQGADKVVVTDEQ DLVLEVERFTEGKGVNVILDELGGPQMTLLGDVSATRGKLVLYGCNGGNESAFPACAAFKKHLQFYRHCLMDFTGHPEMGLERNDESVSKALAHIEQLTR DRLLKPVVDRVFEFDQVVEAHRYMETCPKRGRVVIHVAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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