Pseudomonas aeruginosa BWHPSA028, Q041_00986
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA028 genomic scaffold adgfi-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCGTCGAGCGCGCCGACCTGGCCGTGTCGAAGCACCAGTTCGACATCGTCAGCACCAGGCTGCTGACCCAGTTCTCCAACAACATCCGCAACAACTTCG GCTTCCTCAACCGCGCCGACGAGAGCGGTATCGGCAAGCGCGACAAGCTGTTCGTCCAGGAAGGCCGCAAGGTGTTCAAGGATGTCTGCCCGATGGTCGC CGAGCTGATCGGCGAGCACCTGGCGGCCAATGAAATCCAGGTCGCCGAGGTCAAGCGCTTCTGGCTGCACCAGGCCAACCTGAACATGAACCTACTGATC ACCCGCAAGCTGCTCGGCCGCGACGCCGAGGCGCACGAGGCGCCGGTGATCCTCGACAGCTACGCGAATACCAGTTCCGCCGGCTCGGTGATCGCCCTGC ACAAGCACCAGGACGACCTGCCCAGCGGCGCCATCGGGGTGCTCAGCTCGTTCGGCGCCGGTTACTCGATCGGTAGCGTGATCCTGCGTAAACACTGATC
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| DNA Sequence for Gene |
>Q041_00986
GTGGCGGCGCCTACCGACGCCGAGCTGCTGCCGCGCCTGCTGGCCGGCGAGCAGCGAGCCTTCCGCGAGCTGGTTGGCGCCTACCAGGGCGCCATGCGGG CCGTGGCCTGGGCGATCATCGGCAGATCGCATACCGAGGAAGTGGTGCAGGACGCCTGGCTCGCGGCGGTTCGCGGGCTGGACGGGTTCCAGGGGCGTTC GAGCCTGAAGACCTGGCTGCTGACCATTACCGCCAATACCGCCAAGAGCCGCTTGCGCCAGGTTCGCCGGGAAGTTTTCCTCGACGACCTGCCGGGGCCC CATGGTACGGTGGATGACCAGCGCTTTGCCGCCGACGGTCACTGGAGCCAGCCGCCGCACGCCTGGCACGAGGATTCGCCGGAAGCCCTGCTCGCCGAGG GCGAACTGCGCGATTGCCTGGACAAGACCCTCAACGGTCTGTCCGAGCTGCAGCGCAGCGTGCTGACCCTGCGCGAACGCCAGGGCTTGGAGCTGGAGGA AATCCGTGATCTCCTGGATATCACGCTTTCCAATGTCCGGGTGCTGCTGCATCGCGCCCGCCTGAAGGTCTTCGCCACCCTGGAGCATTTCGAGGAGACC GGCCAATGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTGCAAGGAACTGGTCGCCCGGTCCAGCGACTTTCTCGATGGGCAACTGGACTTCCGCGGACAACTGGCGGTGCGCAGTCACCTGCTCATGTGCCGGCA TTGCCGGCGCTTCATCCGCCAGATGCGCCTGACCCAGGCGACCGTGCGCCATCTGCCGGAGGGGCAGGGGCCGGAACTCGACCGTCTGGCCGCGCATCTC TCCGAATTGCGCAAGGACGCCGCGCGGCGCTGAGCCGGGGTATCCTCGACACCAAGCCGCCGCCCGCGATTCGTGGGCGGCGGCTTTTTCGTTTCCGCTA TCCGGCGTGGGCGAACCGAACCTGGCCTGGCGTGGGCGGCTCTCTCTTCCGCGTGACGAGGTCGAGGAGTGTGGCTGGGCTTGGCGGATATCGCTGCGCG ATATGCGCCCTACGGAGGGGCGGCAATCCGTTTCGCTGGGCGAGCATCCGAAGTCGAGGAGAACGCCTGGGACCTGGCGAATATCACCGACCGATATTTC
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| Amino Acid Sequence |
>RNA polymerase subunit sigma-24
MAAPTDAELLPRLLAGEQRAFRELVGAYQGAMRAVAWAIIGRSHTEEVVQDAWLAAVRGLDGFQGRSSLKTWLLTITANTAKSRLRQVRREVFLDDLPGP HGTVDDQRFAADGHWSQPPHAWHEDSPEALLAEGELRDCLDKTLNGLSELQRSVLTLRERQGLELEEIRDLLDITLSNVRVLLHRARLKVFATLEHFEET GQC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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