Strain | Pseudomonas aeruginosa BL01 genomic scaffold adgeu-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAACAGGCGCTACCTGGCGACCAAGGCCGGCAAGCTCGGGCACATGCTCGGCAGCCTGCACCAGGGCGAGGCGGAAACCACGTGAGTCGCCAGCAAGCCC GCGGCGCGCTGGGACGCGCCTGGTGGTTGCAACTGGCGTTGGCGCTGTTGCCGCTGATCCTGGTCGAGTTCTTCCTCGGCGAACTGCAACCCCTTCCCCA TGGCCTGGCGATGCCGCTGTTCATCGCCGCGCTGCTGTCGATGTTCGTCAATCTGCCGCTGTTCGGTGCCTACAAGCGTGGTCTCATCGCCACCCAGAAA GCGCTGGATACGGCGGAGGAAGCCGCCGCCTGGACCCGCCTGGCGCAGGTGCGCCGCAAGGCCCTGTTCGGCGCCAGCCTGCCGGCCTGGATCGGCGTGC CGGGTGTGTTCGCCGGGCTCAACGGCGTTGCGCTGATCCTGCTCGGGATCACCAGCCTGGTGCTGTTCTGGCTCTACCGTATTCCGCGTCAACTCGGTTG
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DNA Sequence for Gene |
>Q055_00873
ATGCGCTCGTTCTGGCTGCTCGCCTGCCTGCTCCTCAGCCTTTCCGCCGGGGCGGCGCAGCGGGTGGTCAGCCTGGCGCCTTCGCTGACCGACAGCGTCC TCGAACTCGGCGCCGCGCGCCGCCTGGTCGGCGTGCTGGATGGTGGCGAGCGTCCGGCGGCGATTGGCGACCTGCCTTCCGTCGGCCGCTACGGCCAGGT CAATCTCGAACGCCTGCTGGAACTGCAGCCCGATCTGATCCTGGTCTGGCCCGGCAGCGTGCCCGAGGCGCAGTTGCAGCGTCTGCGGGACTTCGGCATC GCCCTCTTCATCGCCGAACCGCACAGCCTCGACGAACTGGCCCTGCAACTGGCTGCGCTGGGCGAGGCATTGGGCGAGGCCGAGGCCGGCCAGCGGCTGT CGACCAGGTTCCGCGAAGGCATGCGGCGCCTGGCCGAGCGCTACCGGCGGGACAAGCCGCTGAAGGTGTTCTACCAGGTCTGGGACCGGCCGCTGTACAC CATTGGCGGACGCCAGGTGATCAGCGATGCGCTGCGCGTCTGCGGTGCCGAGAACCTGTTCGGCGACCTGCCGCAGCCGGCGCCGCAGGTCAGCGTCGAG GCGGTTCTGGCGCGGGATCCGGCGGTCATCGTCGCCGGCAGTCACGCCCAGCTCGAACTCTGGCGGCAATGGCCGGCGCTGGCGGCGACGCGGCGCGGAC AGCTGTACCGGATCGAAGACAAGAACCTCGAGCGGCCGAGCTTCGCCATGCTGGCGGCGACCGAGAAACTCTGCCGCTCGCTCGCCGGGGCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGCTTGCCGGTATCGCGCTGTACCGGCGGATAACGCCGGTGGCGTTATTCGCCCTACGGGCAATTGGGGGGTAGGGCGAATAACCGCAACGCGGTTATC GCTGCCAGTCGGCGGGGTATGTCGGTATGGTGGTGTATCGGCAGATAACGCCGGTGGCGTTATTCGCCCTACGGCAATTGGGGGGTAGGGCGAATAACCG CAACGCGGTTATCCGCCGTTGTCGCTGGGTTTGGCGCTACTGCCGGTCGAGACGCTGGCGTACTGCCTTTTCGATGCCCGCGGCATCCAGGCCGCATTCG GCGAGCATCTCGCTGGGCTTGGCGTGTTCGACGTAGTAGTCGGGCAGGCCCAGTTGCAGCAGCGGGAATTCGAGGCCCTCGCTGGCGAGGAACTCGCCGA CCGCCGAGCCGGCGCCGCCCATCACGGCGTTTTCCTCGATGGTCACCAGCAGTTCGTGGCTGCCCGCCAATTCGCGTACCAGGGCTTCGTCGAGGGGTTT
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Amino Acid Sequence |
>iron-hydroxamate ABC transporter substrate-binding protein
MRSFWLLACLLLSLSAGAAQRVVSLAPSLTDSVLELGAARRLVGVLDGGERPAAIGDLPSVGRYGQVNLERLLELQPDLILVWPGSVPEAQLQRLRDFGI ALFIAEPHSLDELALQLAALGEALGEAEAGQRLSTRFREGMRRLAERYRRDKPLKVFYQVWDRPLYTIGGRQVISDALRVCGAENLFGDLPQPAPQVSVE AVLARDPAVIVAGSHAQLELWRQWPALAATRRGQLYRIEDKNLERPSFAMLAATEKLCRSLAGAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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