Strain | Pseudomonas aeruginosa BL01 genomic scaffold adgeu-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTGCGCCGCGAGGAACCCGGCACGCGCCTCACCGTGTTGCAGTCGGCGGTGGCCGCGCGCGCGGAAACGCTCAGCGAAGAGCGTGTGATCAAGGAAGGC CAGCAGGTGCTGATCCTGCCGCAAGGCCTGCAGGCCAGCGAAGCGGCCCCGGCCCTGGCCGGCGCCTGGGCACAAGGCATGCTGGTGGTGGAGAACGCCC GGCTGGCCGACCTGGTGGCGGAACTGGGGCGCTATTCGCCGGCGCTGCTGCGGGTCGACCCGAGCATCGCCGACCTGCGCGTCACCGGCAGTTTCCCGCT GAAGGACACCCGCCTCGCCCTTCAGGCTTTGGAGCCGAGCCTGCCGGTGCGCAGCGTGAGGCACAACGCCTGGTGGTTCGAAGTGGTGCCACGCTGAACC GAACGGGCCGGCGAAAAATTTTTCCCGCCGGCCCTATCACTTTTTCCGACTCGTCCGGCAAGGAGGCATTGAGACTCGTTTCCATCCAGGAGCCCCGCAC
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DNA Sequence for Gene |
>Q055_00439
ATGCCCCGCCCGACGTTCCGTCCCGGCCTGCTCGCCCTAGCCATCGCCCTCGCCGTTCCCGCACCGTTCCTCCACGCCGCCCCGGCCGAACAGGCCAGCG TGCGCGACTACCGCATCGCCGCCGGGCCGCTGGCAGGCACCCTGAACCGCATCGCGGCCCAGGCCGGCCTGGTCCTCACCCTGGACCCGGCGCTCGCCGA AGGACGCAGCGCCCACGCCGTACAAGGTCGCTTCGACGCGCCCGGCGCATTGCGCGAAGCGCTCAAGGGCAGCGGCCTGGAACTGGTGGAAAATGCCGGC GGCACCTACAGCCTGCGCAAGGTGCCGGAAGACACCCTGTCGTTGCAGGCGATGACGGTCAGCGGCGCCGAGGAAGACCCACTGGGGCCGACCAGCGGCT ACGTGGCCAAGCGCAGCATGACCGGCACCAAGACCGATACGCCGATCCTCGAGACCCCGCGCTCGATCTCGGTGGCGACCCGCCAGCAGATGACCGACCG CGCCGTGCACAACCTCGACGACGCGGTGCGCTACATGCCCGGCGTCGTCGCCAGCAGCTTCGGCAGCGACACCCGCTCCGACTGGTTGAAGGTGCGCGGC TTCAAGCCGACCCAGTTCCTCGACGGCCTGCCGATGGCGGTCGGCGTCTACAACAACCCGAAGCTGGAAACCTGGAACCTGGAGCGTGTCGCCCTGTTGC GCGGTCCGGCCTCCTCGGTCTACGGCCAGACCCCGCCCGGCGGCATGCTCGACATGGTCAGCCTGCGTCCGCAGAACGTCGCCAGTCACGAGGTGAAGGC CGAGGTCGGCAACTACAACCACAAGCAGGTCAGCTTCGACAGCACCGGCCCGCTCGACGACGAGGGACGCTTTCTCTACCGCGTCTCCGGCGTGGTGCGC GACAGCAACACCCAGGTCGACCATATCGACGACAAGCGCTACAACATCGCCCCGAGCCTGACCTGGAACATCGACGACGACACCAGGCTGACCTTCCTCG GCCAGTTCAACCGCGACGATACCGGCATCACCAGCCAGTTCCTGCCGCTGCGCGGAACCAAGTACGACGCGCCGTTCGGCAAGGTTTCCCACCACAAGAA CCTCGGCGATCCGGACTGGGAATACTACGACCGCACCTACTACTGGCTGGGCTACGCCTTCGAGCGGCGGATCAACGATGTCTGGCAGTTCCGCCAGAAC CTGCGTTACCTGCGCAACGACCTGTCGTTCCAGGCGGTTACAGCGGGCACAGCTCATGCCGACGGCACACTGGAACGCAGCACCACCTCGGTGGATGAAG ACGTCAGTCAGTTCGTAGTAGATAACAACTTCCAGGCCGACTTCGAAACAGGCTCCCTGCGCCACACCCTGCTGCTAGGCCTGGATCACAACCGCACCGA CAATCAATACACATCAATCTTTGGCAGCGCGCCGCCGAGCAACGTCAACAACCCGATCTACGGCCAGCCGATCGTCAAACCGGATCGTTCGACGGCCTTC TACGACTACAAGCAGAAGACCTACCAGACCGGCCTCTACGTCCAGGACCAGATCGCCCTCGACAACTGGCGCCTGACCCTCGGCGGTCGCGAGGACTGGG TGCACACAGGCGCCACCTTCTACAACAAGGGCGACGCCACCAATACCAGCCGCGACAAGAAGTTCAGCGGCAACGCGGCGCTCAGCTACATCTTCGACAA TGGCGTGGCGCCCTATATCTCCTATGCGGAGTCGTTCCAGCCCACCACTGGCGCCGATATGAACAGCACCAGTTCGCTGAAGCCGACCGAAGGCAAGCAA TGGGAAATCGGCGTGAAGTACCAGCCGGTAGGCTCCGACTCGCTGTTCACCGCCGCGGTCTATGACCTGCGCCAGGAGAACGTCAGCGTGTCGCAGAACA TAGGCGGCACGCCGGTCACTTCGCAGACGGGCGAAGTGAAGGTCTCCGGGATAGAACTGGAAGCCACCAGCAACGTCACCGACAACCTGAAGATGATCGG CGCCTATAGCTACACCGACACCGAAGTGAAAAAAGGCCAGTACGCAGGCAACCGCCTGCAACAGGCGCCGCGCAACCAGGCCTCGCTATGGGCCGACTAC ACCTGGCACGAGGGTGCGCTGAACGGTTTCAGCGTGGGTGCCGGCGCCCGCTACGTAGGCTCGACCTACGGCGACCAGGCCAACACCTACGACGGCTACG CCGGCTCGTACACCCTGTACGACGCCGCCGTGCGCTACGACCTGGGCCAATTGAACGGCAGCCTGAAAGGCGTCAGCGTGGCGGTCAATGCCAACAATCT GTTCAACAAGGACTACCTGGCGTCCTGCGACGGCTACTACTGCTACTACGGCGACCAGCGCAGCGTGGTGGGCAGCGTCAGCTACAAGTGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGACGCGTCACAGGTGCGTAACGGCGGATAACCGCTTCGCGGTTATTCGCCCTGCCGCAGAACGTACCTTCCGGGCACCGGATGCCCTCCTCCCGCCTG TGGGAGAGGGCCGGGATATCGGTAGCCGGCGCATCGGGGAGGACCTGCATTCCGGGCGCCGGAGATCATCGTTCACCCCGCGATCCGACCCCACAGCGCG CTGGCGTCGTCGTGGATCTTGAAACGCGGGAAAGCCAGGGCCTGGTCGTCGCCCTGTTCGATCTCGCGCAACTCGTCGAGCATGGCGCTCACTCCGACGT CCTCGAGGCGCCGCAGCAACTGTTCGTCGGTATAGCGGCGGAAAGGCTCGACCAGCCGGTCGAAGCCGTCGGTCATCAGCACGAAGGAACGCAACGCGGC GAGCGGCAAGGTCTCGCGCTGCACCTGGCCGAGCCAGCGGTCGCTGATGTCCAGCGCCCAGTAGCCCTCGGGCTTGTTCATCAGCAGGCGGTTCTGCCGC
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Amino Acid Sequence |
>hydroxamate-type ferrisiderophore receptor
MPRPTFRPGLLALAIALAVPAPFLHAAPAEQASVRDYRIAAGPLAGTLNRIAAQAGLVLTLDPALAEGRSAHAVQGRFDAPGALREALKGSGLELVENAG GTYSLRKVPEDTLSLQAMTVSGAEEDPLGPTSGYVAKRSMTGTKTDTPILETPRSISVATRQQMTDRAVHNLDDAVRYMPGVVASSFGSDTRSDWLKVRG FKPTQFLDGLPMAVGVYNNPKLETWNLERVALLRGPASSVYGQTPPGGMLDMVSLRPQNVASHEVKAEVGNYNHKQVSFDSTGPLDDEGRFLYRVSGVVR DSNTQVDHIDDKRYNIAPSLTWNIDDDTRLTFLGQFNRDDTGITSQFLPLRGTKYDAPFGKVSHHKNLGDPDWEYYDRTYYWLGYAFERRINDVWQFRQN LRYLRNDLSFQAVTAGTAHADGTLERSTTSVDEDVSQFVVDNNFQADFETGSLRHTLLLGLDHNRTDNQYTSIFGSAPPSNVNNPIYGQPIVKPDRSTAF YDYKQKTYQTGLYVQDQIALDNWRLTLGGREDWVHTGATFYNKGDATNTSRDKKFSGNAALSYIFDNGVAPYISYAESFQPTTGADMNSTSSLKPTEGKQ WEIGVKYQPVGSDSLFTAAVYDLRQENVSVSQNIGGTPVTSQTGEVKVSGIELEATSNVTDNLKMIGAYSYTDTEVKKGQYAGNRLQQAPRNQASLWADY TWHEGALNGFSVGAGARYVGSTYGDQANTYDGYAGSYTLYDAAVRYDLGQLNGSLKGVSVAVNANNLFNKDYLASCDGYYCYYGDQRSVVGSVSYKW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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