Strain | Pseudomonas aeruginosa BL02 genomic scaffold adggf-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTGGCCCTGGGCGGCGAGCCGCTGGTGGTGGCCGTGCCCAACGGCGATCCGCTGGCGCGGCAAGAGCGGATCGACCTGTACGATCTGCGTGATCGGCCG CTGATCCTGTTTCCACTGGACTACGGCTCCGGCCTCAACGAACTGATCGAGCGCCTCTACCGGAAGGCCGGGCTGGCGCTGACGAGGGGACCGGCCGGAC GCCAGATCACCTCGATCATCGCCCTGGTCGCGGCCGGCCAGGGCGTTGCCCTGGTGCCGCGTTGCAGCACCGCGCTGGCCCGGGCCGGAGTCGTCTATCG CCCGCTGGCCGAGCCCGAGGCGCTGGCCGATTTCCTCGTCTTCACCCGCCGCCATGGCCGCAGCGCCGCGGTGGAGGCGTTCCTCGCCATCCTCGGTGGC TTGGACGCAGGCGAAACACCCCGACACATTTAGTCGCGCGGGTTCGCAAGCGAGATTTCTTATCATTCGTGCCTACGTTCCGCTGACGAGGCTGTTCTTC
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DNA Sequence for Gene |
>Q056_02879
ATGCAGGCAAGCAAAGCTCTACTCGCCGCCCTGGCCCTGGGCATCACCGGCCTGGCCCAGGCCGCCGACGAAGTGGTGGTGTATTCCTCGCGCATCGACG AGCTGATCAAGCCGGTGTTCGATGCCTACACCAGCAAGACCGGCGTGAAGGTCAAGTTCATCACCGACAAGGAAGCGCCGCTGATGGCGCGGATCAAGGC CGAAGGCGCTAACACCCCGGCCGACCTGCTGCTCACCGTGGACGCCGGCAACCTCTGGCAGGCCGAGCAGATGGGCCTGCTGCAACCGTTCAAGTCGGCC ACCATCGAACGGAACATTCCCTCGCAGTATCGTTCCAGCACCGATAGCTGGACCGGACTGTCGCTGCGCGCGCGGACCATCGTCTACTCCACCGAGCGGG TCAAGCCGGAAGAGCTGAGCACCTACGAAGCCCTGGCCGACAAGCAATGGGAAGGCCGCCTGTGCCTGCGCACGGCGAAGAAGGTCTACAACCAGTCGCT GACCGGGACCCTGATCGAGACCCACGGGGCGCAGAAGACCGAGGAAATCCTCCAGGGCTGGGTGAACAACCTGGCCACCGACGTATTCGCCGACGACAAC GCGGTGATCCAGGCGGTGGACGCCGGCCAGTGCGACGTCGGCATCGTCAATACCTACTACTACGGGCGCCTGCACAAGCAGAACCCGAACCTGCGGGTCA AGCTGTTCTGGCCGAACCAGGCCGACCGCGGCGTCCACGTCAACCTGTCGGGCATCGGCCTGACTCGCCACGCGCCGCATCCCGAGGCAGCCAAGGCGCT GGTGGAATGGATGACCGGGCCCGACGCCCAGGCGCTGTTCGCCGGGATCAACCAGGAATTCCCGGCCAACCCGCAGGTCGCGCCGTCAGCCGAAGTCGCC AGCTGGGGCAGCTTCAAGGCCGACAGCATCCCGGTGGAAGTTGCCGGCAAGCGCCAGGCCGAGGCGATTCGCCTGATGGACCGCGCCGGCTGGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCCGGTTATACTCGGCGCCCCGGCTCGTCCGAGCGGGGCGTCGTTCGTTCCGCACCGAGGATTTCGTGGCCCATCCCGCTCCCCGCCGCTGGTACCCC ATCACCTTCACCGTTGCCGCGCTGGTGCTGCTGCCGCTCAGCGTGCTGCTGCTGAGCTGGCTGGAGATCGACCGGGAAATCTGGAGCCACCTGTGGGATA CCCAGTTGCCGCGCCTGCTCGGCAACACCCTGACCCTGGTGCTCGGCGTCGGCATCGGCGTGACTCTACTCGGGGTCAGCCTGGCCTGGCTCACCAGCCT CTGCGAATTCCCCGGGCGGCGCTGGCTGGACTGGGCGCTGATGTTGCCGTTCGCGATCCCGGCCTACGTCCTGGCGTTCGTCTTCGTCGGCCTGCTGGAT TTCGCCGGACCGGTGCAGAGCCTGCTGCGCGAGTGGTTCGGCAGCGGCCTGCGGTTGCCGCGCGTACGCTCCACCGGCGGGGTGATCCTGGTCCTGGTGC
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Amino Acid Sequence |
>iron ABC transporter substrate-binding protein
MQASKALLAALALGITGLAQAADEVVVYSSRIDELIKPVFDAYTSKTGVKVKFITDKEAPLMARIKAEGANTPADLLLTVDAGNLWQAEQMGLLQPFKSA TIERNIPSQYRSSTDSWTGLSLRARTIVYSTERVKPEELSTYEALADKQWEGRLCLRTAKKVYNQSLTGTLIETHGAQKTEEILQGWVNNLATDVFADDN AVIQAVDAGQCDVGIVNTYYYGRLHKQNPNLRVKLFWPNQADRGVHVNLSGIGLTRHAPHPEAAKALVEWMTGPDAQALFAGINQEFPANPQVAPSAEVA SWGSFKADSIPVEVAGKRQAEAIRLMDRAGWN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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