Strain | Pseudomonas aeruginosa BL02 genomic scaffold adggf-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGTCTGCGACTACCTGCGCATCATGTCCTCCGGCAACATGGCGCCGCACGAGCTGGAAGGCCTGTTCGACATGGAGCTGTCCAGTCTCAAGGAGGACCTG GAGCATCCGTCCCACGCGGTGACCAAGGTCGCCGACGCCCTGCCGGGCTTCGGTATCGTCGCCGCGGTACTCGGCATTGTCATCACCATGGCGTTGCTTG GCGAAGGCAGCCAGGCGGAGATCGGCCACCACGTCGCCGCCGCCCTGGTGGGTACCTTCCTCGGGATTCTCGCCGCCTACGGCTTCGTCGGCCCGCTGGC CGTCGCGCTGGAGCACGATGCCAAGGAAGAGTTGAACATGTTCGAGGCGATCAAGGCCTGCCTGGTCGCTTCCGCTTCCGGCATGCCGCCTTCGCTGGCC GTCGAGTTCGGCCGCAAGGTGCTGCTGCCCGCCCATCGGCCGACCTTCGCCGAGCTCGAGCAGGCCGTGCGTGGCCGCTGAGTGGAGGCACTGTCGATAG
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DNA Sequence for Gene |
>Q056_02603
ATGGACAATAACCAGCCGATCATCGTCAAGCGCGTCAAGCGCTATGCCGCCGGCCACCACGGCGGCTCGTGGAAGATCGCCTTCGCCGACTTCGCCACGG CGATGATGGCGTTCTTCCTGGTGCTCTGGCTGCTGTCTTCGGCCACCCCGGAGCAGAAGAAGGCGATTTCCGGATACTTCCAGGACCCCATCGGTTTCAG CGAAAGCGCCAGCCCCTACGTCATCGACCTCGGCGGCACGCCGACGCCGGCGCCGGACAAGACCCTCAATCCGCAGGTCCAGGCCCAGCCGGACTCCAAC GAAAGCCGGATCAGCCCCGAGCAGGACCACCAGGTCAACGCCGACCAGGCCGAGAACCTCGCCGAGCAGGTTGAGCGAGAGCGCCTGGCGCTGCTGCTGC AGGAGTTGCAGAACAAGGTCGACGAAAATCCGATGCTCAAGGACTTCAAGGACCAGATCCACTTCGAGATCACCCGCGACGGCCTGCGCATCCAGATCGT CGACGCCGCCAACCGGCCGATGTTCGACCTCGGCAGCGCGCGCCTGCAGCCGTATTTCGAGGACATCCTGCTGGCCATGGCCGAGACCATCCGCCAGGTG CCGAACAAGATCAGCATCAGCGGCCACACCGACGCCAAGCCCTATGCCGGCAACGGCGACTTCGGCAACTGGGAGCTATCGGCCAATCGCGCCAACGCCG CGCGCCGAGCACTGGTCGCCGGCGGCTATCCGGAAGGGCAGATCGCCCAGGTTGTCGGCTATGCCTCGGCACGCCTGTTCGACGACAAGGACCCGCTGAA CCCGGTGAACCGGCGGATCGACATCGTGGTCCTGACCCGCAAGGCGCAGAAGGCCATCGAAGGCGAGACCGGCGCTCCCGAAGCCAGCGCCCCCGCGGCT GCCCCGGGCGAGCAGCCGAAGCCGGCTGCCGAGGCACCGGCGGCGGGCGCGCAACCTTCGCTACCGGCGGACGAGGTGCAGAAGAAGCTCAACCTGTTCG ACGACGGCGGCAGCCTGAAGCTGGAGCAGATCAAGGGCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTTCAGTAGTCCGTTTCCGGCATGCTTGCCAGAATGTGCCGGTAGCTGGCCATGCGTTGCGGCATGATGCGCCCGTCCTCCAAAGCCTGGAGCAGGGCG CAACCTGGTTCACGGTCGTGCTTGCAGTCGCGGAAGCGGCAATGTCCGAGCAGGTCGCGGAACTCGATGAAACCGGCCTCGACATCGTCTCGCGACACGT GCCCCAGGCCGAACTCACGGATGCCGGGCGAGTCGATCAGGTCGCCGCCGCCGGGAAAATGGAACAGTCGCGCGGTGGTGGTGGTATGGGTGCCCTTGCC GGTCACCGTGGAGAGGTCGCCGACACGGGTGTCGACACCTGGCAACAAGGCATTCACCAGCGACGACTTGCCCACCCCGGACTGCCCGACGAAGACGCTC ACGTGACCGTCCAGCGCGCCGCGCAGTTCGTCCATCGCCAGGCCATTGAAGGCCGACACCTCGATCAGCGGGTAACCCAGGGTGCGGTAGACATTCAGCA
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Amino Acid Sequence |
>flagellar motor protein MotB
MDNNQPIIVKRVKRYAAGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYFQDPIGFSESASPYVIDLGGTPTPAPDKTLNPQVQAQPDSN ESRISPEQDHQVNADQAENLAEQVERERLALLLQELQNKVDENPMLKDFKDQIHFEITRDGLRIQIVDAANRPMFDLGSARLQPYFEDILLAMAETIRQV PNKISISGHTDAKPYAGNGDFGNWELSANRANAARRALVAGGYPEGQIAQVVGYASARLFDDKDPLNPVNRRIDIVVLTRKAQKAIEGETGAPEASAPAA APGEQPKPAAEAPAAGAQPSLPADEVQKKLNLFDDGGSLKLEQIKGD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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