Pseudomonas aeruginosa BL02, Q056_01471
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL02 genomic scaffold adggf-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGCGCAGATCAAGCAACTTATCGAAGGGACGCGCCTGCCCAAGCTGGAAAGCGACGACTACTACAATTTCGTCGACGCCAAGAAGGTCAAGCGGATC GCGGTCAACGACCTGATCCGCGACAAGCTGAGCCGAGGCAGCCTGGCTATCGTCAGCTATGACGGACGCTACGAGATCGTGCCCCGGGATGCGGCGGTGA AGATCCAGGAGCGCGATCCGCGGCGGGTGGTGCTGCTCAACATACAGAGCCAGGAGCCGGACGAAGACGATCCCTACAAGGACTATGTGGTGCCCGACGA TCTCATGTGGTGAGGTCCGCATCCGGAGTGTCGCTTGACCGGTACGGATGCCGGTCAACTACCAATTCTGGAATGCGAAGCAGTTCTAAAATAACTACCG ATGATTTCGTTTCGATAGCATAATGCTTTTCCTCAGAAATCTCCTACGGCTGCCTTTGCGTGCATCTGTGGGCTAGCCGCCTATCGAAAAGGACGTTGGT
|
|
| DNA Sequence for Gene |
>Q056_01471
ATGCCTTCCTCACAGCTTCCGGGGGCTTCGCCCTCGGAGATCGATATCGTTCAGCTGTTCCAGCAATTGTGGGCGTCGAAGTGGCTGATAGCGCTGATCG CGGCCTTGGCGACCGCCGCTGCGCTCGCCTACGCGCTGTTGGCCGTTCCGACCTACCAGGTGGATGTCCTGTTGCGGCCGATCCAGACCAAGGCCCTGGA GGCTGTCAATGTCAAGGGGCTGTATGCCCTGACTCCGCGGGAAGCGCTGGATCGCGTCGGCAACGAGCTGGCAGCCTACTCCGGCAGGCTGGAGTATTTC GAAGCCCATCCAGAGCTATTCCAGCAATTGAACGCCGAGGGCCTGTCCCCCGAGCAGGCTTTCTGGAAGTTCAACCAGGATGCCTTCAGCATGCAGCAGA CGGACTTGAAGAAGGACCCCCAGGCGGCGCCTTTCTTCCGCTTGTCCATGCAGTATCCCCAGGGCATGGATGGTGCCGCCATTCTCAACGGCATGCTCGC GTCGACCATCGAGAACGAGCGTCAGCGAATCCTGGACGACCTCCAGGCGCGTATCGACGGTCGCCTGCAATTCCTCGAGCAGGATATCGAAGGCAAGCGT GCCAGTTACCAGGCTACCAAGGAGGGCAAGATCGCCCGGTTGCTGGAAGCGGACAGCATCCGGCGGGCCGGCCTGGAGGATGAGCTCAAGGCGTTGCGCG GGCGGCTGAAGATGGTGCGCGATTCGCGTATCCAGCAGCTCAACGAGGCTATCCAGATCGCCACCCGGCTGGGGATCGTCAAGCCGACGACCCCGGGCGC ACTGGGAGAGGTCGGGCAGGATGGCTCGCGCAGCGTTTTCCGCACCGAGGTGAATAACCAGCAGATACCCCTGTATTTCATGGGTGTCGATGCCTTGACC GCCGAGCGCGATACCTTGCTCAAACGCAAGGGCGATGACTTCACCGAGCCCCGCGTGGCGAAGATCCAGCAGGAGCTGAAGCAGTTGGAAAACAACCGTG AAGTGCAATACCTGCAGGCTCGAAAGGGCGAGGAGCGTTTCTTCGAAAACATCGACAAGCTGCGTGGAGAGCAGGCGCGTCTACAGACCTTGAGGGCAAG TGACCTTAAGATCGAACTGGTACGGGTCGACCAGAAAGCTGCAACGCCTCTGAGGCCGATCAAGCCACGCAAGGCTCTAGTGGTGGCCTTGGGCCTCCTG GGTGGGCTGGCGCTCGGCGTGCTGGTGGCTCTGGTTCGGGCGATGTTGCGTGCCCCACGGCAACGGGTACAGGAAGATAGCCTGCCGCCGGGAGTCGTCA GCCTCGACCGGAGCCTTTCCGGGACCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GACCAAAGGTGCGCCCCCGAAGTACGCGGGGGCGCATGGTTCAGGCCGATTTACCTATCTGCCGCAGTTCTTCTTCTTTCTCCAGTTTGATCCGATAGGC GTGGGCGTCATCCTCGTTATGGAAGACGCCAACCAGCAGTCCCTGCTGATGCACGTCCCAGCAGCGGCGGCCAAGCGCACGCAGCTCGCGGGATTTGTGG TCATCGTCACGCTCGGTCACTGTCACACTCATCTTTTCTGCTCCAGGGTTGATCTGCATCAAGGCAAATCCAGCCTATTTCAATAGCAGGCTAATCAAAT AGTCCTGGAATTGAGAAAAACCTTTTCAGTTTCCAAGGTGTGAAGGTGGCATGCCGGATGCTCTGGAACAGGCCTCTTCCCTCAGGCGTATGCGGCCGAA CAAGGCCGCTTCCGTGAGGGCGGTAATCGCCAACAGGCGATCCAGGCGCAGCAGCAGAGTCGCTCCTTCGACGGCCACCTCAAGGTATTCCTCCTTGCCG
|
|
| Amino Acid Sequence |
>hypothetical protein
MPSSQLPGASPSEIDIVQLFQQLWASKWLIALIAALATAAALAYALLAVPTYQVDVLLRPIQTKALEAVNVKGLYALTPREALDRVGNELAAYSGRLEYF EAHPELFQQLNAEGLSPEQAFWKFNQDAFSMQQTDLKKDPQAAPFFRLSMQYPQGMDGAAILNGMLASTIENERQRILDDLQARIDGRLQFLEQDIEGKR ASYQATKEGKIARLLEADSIRRAGLEDELKALRGRLKMVRDSRIQQLNEAIQIATRLGIVKPTTPGALGEVGQDGSRSVFRTEVNNQQIPLYFMGVDALT AERDTLLKRKGDDFTEPRVAKIQQELKQLENNREVQYLQARKGEERFFENIDKLRGEQARLQTLRASDLKIELVRVDQKAATPLRPIKPRKALVVALGLL GGLALGVLVALVRAMLRAPRQRVQEDSLPPGVVSLDRSLSGT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|