Pseudomonas aeruginosa PAO1, PA3486 (vgrG4b)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGCGAGCAGGCGCCTGGGCGACGGCGAGGCGCGCTACAAGGTAGAGGAAGACGACGGCGGCTCCGCCGGCAGCGAATACCGCCTGTGGGCAGCCAAGCC GGCGGGCGCGCGGTGGATCGTGGTCAGCGCCAGCGAGCAGAGCGAGGATGGCGAACCGACCTTCGCCCTGGCCTGGGCGCTGCTGGAGCGGGCCAGGTTG CAATAGAACCGCTCTCTGCGGAGTGCCGGACGCTCCGTGGAACCTCCGTCGATCCGGGCGGAGCAGCATCCTGCTCGGGTTGCGGTAGCGCTTTTTCGCT CAGTCTGCGCCCATCGGATTTTCCCTGAAATATTTTGTTTCATAGTACTGAGACTCAGGCGCGCCGCGGTTTTCCGGCGATGTGCGCAACAATTTGCACA GTTTTTTTGACGTAGCATCCGCGCGATCACGCACTTCGGATCGAGCACGGCGAACAGGGACGCCAGCCGTGCAGGTTTTTCGAGAAACAGGGGACAGCGG
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| DNA Sequence for Gene |
>PA3486
|vgrG4b
ATGTTCAACCCGGCCAACCAGACCCACTTCAGCCTCAGCCTCGACGGCCTCCGTCACGACCTGCAGGTTCTCGAATTCAGCGGCCACGAAGGCATCAGCC GGCCCTACCGCTTCGAACTCGAACTGGTCAGCGAGCGCGCCGGCCTCGACCTCGAAGCGCTCATGCACCGACCCGCCTTCCTCGCCTTCACCCCGCAGGG CCAGGGTGTCCACGGCCTGGTCTACGGCGCTGCCCAGGGCGATGCCGGCAAGCGCCTGACCCGCTATCGCCTCACCCTCGTCCCACACCTGGCCTACCTC GCCCAGCGCAACAACCAGCGGATCTTCCAGCACCTCACGGTGCCGCAGATCGTCGCCCTGATCCTCGAGGAGCACGGCATCCTCGCCGACGCCTACCGCT TCCAGCTCGGCACCCGGTATCCCGAGCGCGAATACTGCGTGCAGTACGACGAAAGCGACCTGCATTTCGTCCAGCGCCTCTGTGCCGAAGAGGGCATCCA TTTCCATTTCCGGCACAGCGCCGAGGCGCACCTGCTGGTGTTCGGCGACGACCAGACGGTGTTCCCCCGCCTGGGCCGTCCCACCGCCTACGTGCACGAC AGCGGGCTGGTCGCCGACGAACCGGTGATCAAGCGCTTCAGCCTGCGCCTGGCCAGCCGCACCACGCGCACCACTCGCCGCGACTACGACTTCGAGAAGC CGCGGCTGCTGCTGGAGGCCGGCAATCGCCCCGCTGCCGACGCCCCGGCCGAGCCGGACCTGGAGGACTACGACTACCCCGGTCGCTTCGTCGATCGCCA GCGCGGCAAGCTGCTCAGCCAGCGCGCCCTGGAGCGGCACCGCGCCGACCGGCGCCTGGGCGAAGGGGTCAGCGACCAGCCGCTGCTGGTCAGCGGGCAC TTCCTGGAGATCGCCGAGCACCCGCGCGCGGAGTGGAACGACCTGTGGCTGCTCAGCGAAGTCTTCCACGAAGGCAAGCAGCCGCAGGTGCTGGAAGAGA ACGTTACCTCCGACACGTCGGCCAGCACGGACGACTTCCAGCAGGGCTACCGCAACCGCTTCCTCGCGACGCCCTGGGAGGTGTTCTTCCGCCCGCCGCT GGAGCACCCGAAGCCGCGCGTGCTGGGCAGCCAGACCGCGGTGGTGACCGGCCCGCCAGGCGAGGAAATCCACTGCGACCGCTACGGCCGGGTCAGGGTG CAGTTCCACTGGGACCGCGAGGGGCAGGGCGACGACAAGAGCAGTTGCTGGCTGCGCGTAGCCAGCGGTTGGGCCGGCAACGGCTATGGCGGCATCGTCA TTCCGCGGGTCGGCATGGAAGTGCTGGTGGACTTCCTCGAAGGCGATCCCGACCAGCCGCTGGTCAGCGGCTGCGTCTACCACGCCGCCCACCCGGTGCC CTACGAGTTGCCGGCGAACCAGACCCGCAGCGTCTTCAAGAGCCTCAGCAGCCCTGGCGGCGATGGCTACAACGAGCTGCGCATCGAGGATCGCAAGGGC CAGGAACAGATCTTCGTCCATGCCCAGCGCGACTGGGACGAGAACATCGAGCATGACCAGAAGATCCGCGTCGGCCACGAACGCCACGACACCGTGGAGG CGAACAGCTACAGCGAGTTCAAGGCCGAGGAGCATCACACCGTGCACGGAGAGCGCAAGGTCGAGCTGAAGGCCGATGACCACCTGACGGTCGGCGACAG CCAGCACGTGAAGCTCGGTCGTGCCTACCTGGCCAGGGCCGGGCGCGAGATCCACCTGAAGGCCGGGCAGAAGATGGTGATCGAGGCTGACAGCGAACTG ACGGTGAAGGCCGGCGGCAGCTTCATCCGGCTCGACGCAAGCGGCATCGCCATCAGCGGCCCGCTGGCACGGATCAATGCAGGCGGCGCACCGGGAAGCG GCTCGGGGATCGCGATCAAGATGCCGTTGACGCCGGGGGCGGCGGACGCCGATGTCGCAGGACGCCCGCTACAACCCGCCAACGCCGGTCTCCACGCCAG CGATCCGAAGCAGAACGGCGAATACCGCTTCGATATCCGTTTGCAGGATATTCCCGGAGACGAAGGATTCCCCTTGATTCATACGCCCTGGCGCATCGTC CAGGGTAAGGAGCACAACCTGGTATTGGAAGGCGAGAGCGACGAGAAGGGACGGTTGGTGCTGGACGACACTCAACAGCGTCAGCTATCGAACGCCTGCG AGCGTGCGCCTGGCGATGTCTGGCTGGTGTATCCGGGGCAACGAATAGGCATCCGTCCGCATCGGGAGCGTGAGGGTTGGGACGCCACGCGCCACGCGCT GGGCGCGCTGGACTTCCATGACACCCTGGGCGGCCAGCGCGCGCCCACCCCGCTCGAACACCAGCGCGGCAAGCTCGACAGTTGCTGCGAAGGCGACCTT TATTCCCACCTACTGGCCAAGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCATGTTGCAGAAGAAGCCCTACAACGGCCTCCACGAAAAGGAACTCAACCAGATCAACCAGCAGGATGGCAGCCCCTGCGTAGCCATTTCCGCACCGG GCTGTTTCATCAAGGGGTCCAACCTCTTTTCCGAAAAGCGGGCCGGTAACCGGGTCCGCTTCTTCACCACCGGCCGGGACTACTTCAGCGACCTGGCCAG CGCCCTCGACAGCGCCAGTTCGAGCATCTTCATCACCGGCTGGCAGGTCAACTACGACGTCCTCCTCGACGGCCGCCGCAGCCTCTGGCAGTGCCTGCGC CAGGCGCTGGAGCGCTCGCCCGCGCTGAAGGTCTACGTGATGCCCTGGCTCAGCCCTTCCGGCAGCCTCGGCACCTATGACTTCGAAACCATGCTCGCGG TGTTCCAGCTCAACGCCGGACTCGAGGGCGGCGCGCGCGCCTTCTGTACGCCGGCGATCCAGCAGAGCGACATGCAGGGACTGGGCGTCGCCTTCTCCCA
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| Amino Acid Sequence |
>VgrG4b
MFNPANQTHFSLSLDGLRHDLQVLEFSGHEGISRPYRFELELVSERAGLDLEALMHRPAFLAFTPQGQGVHGLVYGAAQGDAGKRLTRYRLTLVPHLAYL AQRNNQRIFQHLTVPQIVALILEEHGILADAYRFQLGTRYPEREYCVQYDESDLHFVQRLCAEEGIHFHFRHSAEAHLLVFGDDQTVFPRLGRPTAYVHD SGLVADEPVIKRFSLRLASRTTRTTRRDYDFEKPRLLLEAGNRPAADAPAEPDLEDYDYPGRFVDRQRGKLLSQRALERHRADRRLGEGVSDQPLLVSGH FLEIAEHPRAEWNDLWLLSEVFHEGKQPQVLEENVTSDTSASTDDFQQGYRNRFLATPWEVFFRPPLEHPKPRVLGSQTAVVTGPPGEEIHCDRYGRVRV QFHWDREGQGDDKSSCWLRVASGWAGNGYGGIVIPRVGMEVLVDFLEGDPDQPLVSGCVYHAAHPVPYELPANQTRSVFKSLSSPGGDGYNELRIEDRKG QEQIFVHAQRDWDENIEHDQKIRVGHERHDTVEANSYSEFKAEEHHTVHGERKVELKADDHLTVGDSQHVKLGRAYLARAGREIHLKAGQKMVIEADSEL TVKAGGSFIRLDASGIAISGPLARINAGGAPGSGSGIAIKMPLTPGAADADVAGRPLQPANAGLHASDPKQNGEYRFDIRLQDIPGDEGFPLIHTPWRIV QGKEHNLVLEGESDEKGRLVLDDTQQRQLSNACERAPGDVWLVYPGQRIGIRPHREREGWDATRHALGALDFHDTLGGQRAPTPLEHQRGKLDSCCEGDL YSHLLAKD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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