Strain | Pseudomonas aeruginosa BL03 genomic scaffold adgeM-supercont1.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCATGGTGCTCCTCCGAGATGTGCGGGCTTTCATCTGACGCAATTCGGGGATTCCTGTCAATGCTGGCAATGGAATAAGGCAAGGATCTTTGAACCCTAT GGATTGCGCTCGAAACATGCTGGCAAAGCGCTTCGCTTTCATTCGCTGAAAATAATCTGAACCACTGGCGAAACACCCTCTCAGAGTTAGGGCATGCGCA ACGCATGCGTCCATGAAATCTGTTCTGAAGAGATTATTCGGAGGAAATAGAAATGGCACAACATCAAGGTGGTAAAGGCAACTTCGCGGAAGACCCGAAA CGTGCTTCGGAGGCCGGCAAGAAGGGCGGCCAGGCCAGCGGCGGCAACTTCAAGAACGATCCGCAGCGGGCCTCCGAGGCTGGCAAGAAAGGTGGCCAGC GCAGCCACGGCGGGAACTGATAACCGCGCAGTGAAGTGAATGGGGCGGAGCAGGGAGGCATCCGCCCCATTTTCATGCCCAGGATGAGGAGAGGAAACCG
|
|
DNA Sequence for Gene |
>Q057_06260
ATGAGCGAGCAGAATAACGAGCAGCGCAGCCAGGCGGCCGGCACCGACACCGTCGACCGTGGCAACAGCAACGCCAAGCTGGAACAGCTGGAGGCCTATC GCGAGGACGCCACCGGAGAGGCCCTGAGCACCAATACCGGCACCCGCATCGCCGATAACCAGAACACCCTGAAGGCCGGCGAGCGCGGACCGTCGTTGCT CGAAGACTTCATCATGCGCGAGAAGATCACCCACTTCGACCACGAGCGCATTCCCGAGCGCGTGGTCCACGCTCGTGGCTCGGCGGCGCATGGCTACTTC GAGGCCTACGAGGACCTCAGCGACCTGACCAAGGCCGGCTTCCTCGCCGAGGCGGGCAAGCGTACCCCGGTCTTCGTGCGTTTCTCCACCGTGCAGGGGC CGCGCGGGTCCGCGGATACGGTGCGTGACGTACGCGGCTTCGCCGTGAAGTTCTATACCGACGAAGGCAACTTCGACCTGGTCGGCAACAACATGCCGGT GTTCTTCATCCAGGATGCGATCAAGTTCCCGGACTTCGTCCATGCGGTGAAACCCGAACCGCACAACGAGATTCCCACCGGAGCGTCTGCCCACGACACC TTCTGGGACTTCGTTTCGCTGACCCCGGAGTCGGCGCACATGGTCATGTGGCTGATGTCCGATCGCGCCATTCCGATCGCCTACCGCAACATGCAGGGCT TCGGCGTGCACACCTTCCGCCTGGTCAACGCGGCCGGCGAGAGCGTGCTGGTCAAGTTCCACTGGCGACCGAAGTCCGGGACCTGCTCGCTGGTCTGGGA CGAGGCGCAGAAGCTCGCCGGCAAGGACCCCGACTTCAACCGGCGGACCCTCTGGGAGGACATCGAGAAGGGCGACTATCCCGAATGGGAGCTGGGCCTG CAGGTGATCCCGGAGAACCAGCAGGACAGCTTCGACTTCGACCTGCTCGACCCCACCAAGCTGGTGCCCGAGGAGTTGGTGCCGGTAAGGGTGGTGGGGC GGATGGTACTCAACCGCAACCCCGACAATTTCTTCGCCGAGACCGAACAGGTGGCGTTCCACGTCGGCCACGTGGTCCCCGGAATCGACTTCACCAACGA CCCGCTGTTGCAGGGTCGGCTGTTCTCCTATACCGACACCCAACTGCTGCGCCTGAGCGGGCCGAACTTCAACGAAATCCCGATCAACCGCCCGCTGTGT CCGTTCCACAACAACCAGCGCGACGCGCCGCACCGGCAGACCATCAACCGCGGCCGGGCTTCCTATGAACCGAACTCGATCGACGGCGGCTGGCCGAAGG AAACCCCGCCGGCGGCGCGCAACGGCGGCTTCTCCACCTACCACGAGCCGGTCAGCGGCAGCAAGCTGCGCAAGCGCGCCGACTCCTTCGCCGATCATTT CAGCCAGGCCGCATTGTTCTGGCACAGCATGAGCGAGGCCGAGCAGGCGCATATCGTCGCCGCCTACAGCTTCGAACTGTCCAAGGTCGAGCGGCAATCG ATCCGTGAGCGCGAAGTCAACCAGATACTCCTCAACATCGATCCGCAACTGGCCGCCAGGGTCGCGGCGAACGTCGGTGTGCAGCTCGCCGCGCCGGCCA ACCCGGCACCGCAGCCGAAGCCGTCGCCGGCGCTGAGCCAGATGAACCTGCTGTCCGGCGACATCCGTTCGCGCAAGGTGGCGATCCTGATCGCCGACGG CGTCGCCGAGAGCGACGTCAGCGACCTACGCGACGCGCTCCGCCAGGAGGGCGCGGACGCCAAGCTGATCGCGCCCAGCGCTTCGCCGGTGCAGGCCGAA AACGGTGCCGAACTGATCCCGGAGGGAACCTGGGACGGCCTGCCGTCGGTAGCCTTCGACGCGGTCTTCGTGCCTGGTGGCGCGGCCAGCAGCCAGGCCA TCGGCGCGGACGGACGCGGCCTGCACTACCTGCTGGAAGCCTACAAGCACCTGAAGCCAGTGGCCTTCGCTGGCGATGCCCAGGCGCTGGCCAGCCAGCT TTCGTTGCCTGGCGACCCCGGCGTGGTGCTCGGCGCCACGGCCACCGATGTCTTCCCCGGTCTGCGCCAGGCATTGATGCAGCACCGGATCTGGCAGCGC GAGGCGGCGACCAAGGCGATCCCCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGAGCGCCGCTGGCGAATCCGATCGCACCTTCCCGTCGTCTCGTCGGTCACAGCTGGAAAGGGCGGCTGGCCGAGCGATTCGGCGGGAGGACCCGGATGA CCTTGCGTTGCCTGATAGGCGGTTGCGACTGGTGCCGGCAACCGGCGTTGCGACTGGGTGAGGAAACCTTCGACTGCGAGCGCTGCCTGCGTTGCGGTGC CCTGCGCTACAGCGAGATACAACGCCGATGAGCGCCTGGGAGACGTTGTGGAAGATCCTCGGCGAGGAGTTCGCCGATCTCGCCGACTTCGAGCAGACCG CCCGCGCCGCGTTGCGCCTGCTGCTGGCGGCGGCGCTCGGCGCGGTACTCGGCTACGAGCGCGAGCAGAGCGGCAAGGCCGCCGGCCTGCGCACGCACAT GCTGGTAACCCTCGGCGCGGCGCTGTTCGTCATGCCGCTGCAATTGCAGAGTGGCGGGGCGGACGCGCTGAGCCGGGTGATCCAGGGCACCGTCGCCGGC
|
|
Amino Acid Sequence |
>hydroperoxidase II
MSEQNNEQRSQAAGTDTVDRGNSNAKLEQLEAYREDATGEALSTNTGTRIADNQNTLKAGERGPSLLEDFIMREKITHFDHERIPERVVHARGSAAHGYF EAYEDLSDLTKAGFLAEAGKRTPVFVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGASAHDT FWDFVSLTPESAHMVMWLMSDRAIPIAYRNMQGFGVHTFRLVNAAGESVLVKFHWRPKSGTCSLVWDEAQKLAGKDPDFNRRTLWEDIEKGDYPEWELGL QVIPENQQDSFDFDLLDPTKLVPEELVPVRVVGRMVLNRNPDNFFAETEQVAFHVGHVVPGIDFTNDPLLQGRLFSYTDTQLLRLSGPNFNEIPINRPLC PFHNNQRDAPHRQTINRGRASYEPNSIDGGWPKETPPAARNGGFSTYHEPVSGSKLRKRADSFADHFSQAALFWHSMSEAEQAHIVAAYSFELSKVERQS IREREVNQILLNIDPQLAARVAANVGVQLAAPANPAPQPKPSPALSQMNLLSGDIRSRKVAILIADGVAESDVSDLRDALRQEGADAKLIAPSASPVQAE NGAELIPEGTWDGLPSVAFDAVFVPGGAASSQAIGADGRGLHYLLEAYKHLKPVAFAGDAQALASQLSLPGDPGVVLGATATDVFPGLRQALMQHRIWQR EAATKAIPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|