Strain | Pseudomonas aeruginosa BL03 genomic scaffold adgeM-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGTGCTACCCCCGGCAGGCGTAGCCGCGGCCGCCTGCCTCGGCAAAAAGCCATCAGCCGGCACGCTTCGACGCCCCTCATGGCGCCCTTTCGCCAACTAC CAATTCTCATAGTTGTGAGGGGAAATTTGTATCTTATTTTAAATACCCACGAAACATATAAAAACACACACAGCGAAACACTTCGGAAAACCAACGCAAG GTGGAAGTGCAATGCGTGACCGTGAATCCATTCTCATCGCTTTTCTCTCTTTCCTGACGATAAGACTGCATGGCAGCAGTTGACTGCCCTTGAGTCGACG GCACTCCGTATTTCCATAACGGTTTTTCCGGGCAAGGCGCCTCGACGCTTGCCGCTCGCGTGAGCGAGCCGGTGGGCGGCGGACGACTGGCAGAGCCCGG GAAGACTCGGTCGCCGTCTTCGCGAAAAACCAAAAATCCTTCATTTAGCCGAAGAAGCCGGCAGATGGACTCATTTTTTCGAAAAAAGGCGATTGCCAGA
|
|
DNA Sequence for Gene |
>Q057_05319
ATGTCCCAGAACTCCCTGCTCGACCTGTACGCGCACCCGACGGTGGTGGCCCGCTTCAGCGAAATGGCAGCGCTTCATCCCCATCGCGAAGCCATCAGGG ACCGTTTCGGAAGTGTCGACTATCGGCAACTCCTGGATAGCGCCGAACAACTTTCAGACTATCTTCTCGAGCATTATCCGCAGCCGGGAGTTTGTCTTGG AGTGTACGGCGAATATTCTCGGGAAAGCATTACCTGCCTGCTCGCCATACTGTTATCCGGCCATCACTACTTATATATAGACCTGAAACAACCGGCGGCC TGGAATGCAGAGTTGTGCCGGCAGGTCGACTGCCGCCTGATCCTCGACTGCTCGACCACGCCGACGCCGGCCAACGGTCTTCCCTGCGTCCCGGTCAGGC ACCTGCCTGCCGCTCCAGCCTCGGTCGCCCGGCCATGCTTCGCGGCGGACCAGATCGCCTACATCAACTTCTCCTCGGGCACCACCGGCCGCCCGAAAGC CATCGCCTGCACCCACGCCGGCATTACCCGCCTGTGCCTGGGCCAGTCGTTCCTCGCGTTCGCTCCGCAGATGCGCTTCCTGGTGAACTCGCCGCTGTCC TTCGATGCGGCGACCCTGGAGATCTGGGGTGCGCTGCTCAACGGCGGCTGCTGCGTGCTGAACGACCTCGGCCCCCTCGACCCGGGCGTACTGCGCCAGT TGATCGGCGAGCGCGGAGCCGACAGCGCCTGGCTCACCGCCTCGCTGTTCAACACCCTGGTGGACCTCGACCCGGACTGTCTCGGCGGCCTTCGCCAGTT GCTCACCGGCGGCGACATCCTCTCGGTGCCGCACGTGCGCCGGGCGCTGCTGCGGCATCCGCGACTGCACTTGGTGAATGGCTACGGACCGACGGAGAAC ACCACCTTCACCTGCTGCCATGTCGTCACCGACGACGACCTCGAGGAAGACGACATCCCCATCGGCAAGGCCATCGCCGGCACCGCGGTGCTCCTGCTCG ACGAGCACGGACAGGAGATCGCCGAGCCCGACCGGGCCGGGGAGATCGTCGCCTTCGGCGCCGGCCTGGCGCAGGGTTATCGGAACGATGCGGCGCGCAC CCGCGCCAGCTTCGTCGAGTTGCCCTATCGCGGCCGCCTCCTGCGTGCCTACCGTACCGGCGACCGCGCTCGCTACGACGAGCAGGGCCGGCTGCGCTTC ATCGGCCGCGGCGATGGCCAGGTCAAGCTGAACGGCTATCGCCTCGACCTCCCCGCCCTGGAACAGCGCTTCCGCCGCCAGCCGGGCATCCTCGACTGCG CCCTGCTGGTCCGCGAGCGCAACGGCGTCAAGCAACTGCTCTGCGCCTGGACGGGAAAAGCCGACACCAGCCCGCAGGCCCTGCTCCGCCAACTGCCCAC CTGGCAGCGCCCGCATGCCTGCGTCCGGGTCGAGGCCTTGCCCTTGACGGCGCACGGCAAGCTGGACCGCGCCGCCCTGCTGCGCCGCCTGGAAGAACCG CTGGAGCGCTGCGCCAGCGCGCTCGATCCCGACCAACGCGGCTGCGCGCAGCTGTGGAGCGAATTGCTGGGTTGCGAGGTCGGCGCCGCCGACCAGGATT TCTTCCTCTGCGGCGGCAACTCGTTGCTCGCCCTGCAACTGGTCGCCCTCTGTCAATCGGCGGGTGCGGGAGCAAACCTGGGACTCGCCGACTTGCAGGC AAACTCGCGCCTCGACCAGTTCAGCCGTCTCCTGCGCAGCCACGGCCTGGCGCCGGAGCGTCTGCTGGAACGGGCGGCGACGCCGGAGCAGCCGCTGGTG CTGTCGAGGAGCGCGGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACGTCGGTCTCTCCGCGGAGGTGCGCTACCACTGGTTCCGCGAGCACCTGGTGGTGGTCGGCGATTGGCACCGCCTGTCCCCCTCCGAGCGCGACCGCCT GCGGCACCAACCGATGCCGGATGAGGCCGCGCAGTCCTTGCGCGTCGACCTGTCGCCCTGGTCCTGCGGGATGGTCTTCAGCGAGCTGCTCGGCGCCGAC CTGACCCGCTTCGGCCTCTGCTACCTGGCTCCGGCCGAGGTGCCGGCATCCGACCTGACGCGCCTGGGACGGCGCCTGCGCGAAGAGTTCCCGTTGCTCG ACAGCCAGGTGGACAGCGGCGCGGAAGGTTTCGAACTGGTCGTCCACGGGCAGCCCGAGGAGAGCCCGGCGCTGGAAGTCGGCCCCTTCGCCGACGAAAA CGCGCTCATCGCAGCGCTGCTGCAACGCCCGCATTCCCTGTTCGAGCGCGGCCTGCTGCGACTGTTCCACGGGCGCTGCGGAGGACGTGCGCGCTGGGGC
|
|
Amino Acid Sequence |
>AMP-binding protein
MSQNSLLDLYAHPTVVARFSEMAALHPHREAIRDRFGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHYLYIDLKQPAA WNAELCRQVDCRLILDCSTTPTPANGLPCVPVRHLPAAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLGQSFLAFAPQMRFLVNSPLS FDAATLEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLDPDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTEN TTFTCCHVVTDDDLEEDDIPIGKAIAGTAVLLLDEHGQEIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRF IGRGDGQVKLNGYRLDLPALEQRFRRQPGILDCALLVRERNGVKQLLCAWTGKADTSPQALLRQLPTWQRPHACVRVEALPLTAHGKLDRAALLRRLEEP LERCASALDPDQRGCAQLWSELLGCEVGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSHGLAPERLLERAATPEQPLV LSRSAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|