Strain | Pseudomonas aeruginosa BL03 genomic scaffold adgeM-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCAACCTGCTCGCCGGCCTGCTCACCGGCATGGGCAAGGACGGCGCGCGCGGGCTCCTGGCGATCCGCCAGGCCGGCGGCTACACCCTGGCCCAGGAC GAGGCTACCTGCGTGGTCTACGGCATGCCCCGCGAAGCGGTGGAACTGGGCGCCGCGGAAGATGTGCTGCCGCTCGAACGGATCGCCGCCGCGCTGCTCC AGCAAGCCGCCCGGCGCGGCAGCGGCAACCGCCTCTGAGCGGGATCCTGGCCGGCCCGCTGCGCTTTTTCGCCGCCCCCCGCAACCTCCCCCGCCGAGAC CCCGCCGACGACAGGCCCGAACCACGGGCCTTTGCCTGCTCGCCATCATTGTGACGTCAAATTAATGGCGAAATAAAACCAAATTACGTTGCCTGAAATA ATGCACATCTGCACAATTGGCCCTTTCGCCAAAAGTTCGACACACGCTTTCGATCCATGATTTCGGCCGCGGGCCGGGCGAGAAACTGATAGGGATAGCC
|
|
DNA Sequence for Gene |
>Q057_02850
ATGGCGGCGAACTGGGGGTTGCGCGGCAAATCGGTGGTGGCGCTGTTGCTGGCCTGTGCCCTGGCACTGGTCCCGGCGGTGCTGCTGGGCTGGCGCGCGA TGGACGACATCCGTACGCACTTCGGCCTGGCCTACGCGAAGAACTTCACCCTGCTGCACCGGCAGAAGATCCTCGCCCCGGTCTCCCGCGAACTGGCGTT GTCGCGCCGTTTCGCCGAATCGGTGGTGACCCGCGACTGGCTGCTGAAGGAAGACGACCCGGCGCGCCGCGCGCTGTTCTTCCGCGAGGCCGAGGGCTAC CGCGGCGACTTCCGCGACCACGCCTACTTCATCATCGCCAGCGGCTCCCAGCACTACTACTTCAACGACGGCAGCCAACCCTACAGCGAACGGCCGCGCT ACACCCTGGAGGCCGGCGACCCGGAAGACGCCTGGTACTTCAATACCCTGCGCAACAGCGCCGCCTACAACATCAACGTCAATGTCGACAGCAAGCTGAA CCTGACCAAGGTCTGGTTCAACCTGGTGATCCGCGACCAGGGCCGGCCCATCGGCCTGGCCGGCAGCGGCCTGGACCTGAGCGGCTTCCTCGACGACTTC ATCATCGCCCGCGAGCCGGGCGTGACGCCGATGATCGTCGGCGACGACGGCGCCATCCAGGCCCACCCGGACCGCCGCCTGATCGCCTACAGCTCCGCCG CCGGCGGCGCCAGCGAACGCCACCGGGTGTTCGACCTGCTCGACCAGCCGGAACAGCGCGACGCCCTGCGCGAGGCCATGCGCCTGGCCCGCGCCAAGGC CGGCTCGGTGCACTGCCTGTGGGCCGGCCTCGACGGCCGCCAGCAACTCTTCGCCGTGGCCTACATTCCCCAACTGCGCTGGTACGTGCTCACCGCCGTC GACCTGCACGCCGCCCAGGTCCTCGACAACCGCTGGCTTTGGCCGCTGGCGGGCACGTTCCTGCTGTTGCTGGTGGCCCTGCTGCTGGGCTTCGCCTATG CCGTCGAGCGCCTGCTGTTGCGCCCCCTGCGCAGCCTCAAGCGCTCGGCCAAGGCGATCGCCGCCGGGCGCTACGACACGCCGCTGCCGCTGGCGCGCCA GGACGAGATCGGCTCGCTGTCGAAGGCCTTCGCCAGCATGGCCGACCAGGTCCGCCGGCACACCGCCGAGCTGGAAGACAAGGTCCAGGAGCGCACCCAG GCGCTGGAGGAAGCCAACCGCGAGATGGCCGCCGCGCAGAAGAAGATCGGCGACAGCCTCGACTATGCCAGCCTGATCCAGCGCGCGATCCTCCCCGACC GCCAGCTCAGCGCCACCCTCGGCGAGCATCACTTCATCCTGTGGAAACCGCGCGACGTGGTCGGCGGCGACTTCTACGTGTACCGCGAGCAGGCCGACGG CTACCTGATCGGCGTGGTCGACTGCGCCGGTCACGGCGTGCCCGGCGCGCTGATGACCATGCTCGCCCGCGCCGCCATCGACCACGCCATCGAGGCGGTG GGCAGCCGCGACCCGGCGGCGATCCTCGGCGAGACCGACCAGGCGATGCGCAGCATGCTCAGCCAGGAGCAGATCCCCCAGGCGCTGGCCACCAACATGG ATGCCGGGCTGGTCTGGGTCGACCGCCGGCGCCGCCAGCTGGCCTTCGCCGGGGCGAAGATCTCGCTGTACGCCAGCGACGGCGAGGAGGTCCAGGAACT CAAGGGCGCGCGCCGGGCGATCGGCGACAAGCGCCGTGGCGACTACCGCAACATCGAGGTACCGCTGGCGCCGGGCTGGACCTTCTACCTGAGCACCGAC GGTTTCCTCGACCAGGCCGGCGGCGAACACGGCTTCGGCTTCGGCAGCCGGCGCTTCGCCGACATGCTCCGCGACCACGCGCGGCAGCCGCTCCCCGAGC AGGCCGAGGCCTTCGTGGCGACGCTCGCCGAGTACCAGGGCGAGCACCCGCAACGCGACGACATCACCATCCTGTCCTTCCGATTCGACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGGCACCCATGGAAACGCTAGACCTGCTGGCCATGCGTGAAAGCTACACCCGCCAACGCATCCTGCTCTGCTTCAACGGACCGATCTCGCGCAGCCTGAT CGAGGAGATAGGCCACGCGCTGCGCAACTACCTGCACGCCGAACAGGCCAAGCCGAGCGAAGCGATGGACGTCTTCGCGGTGTACATCGAGATGACCCAG AACATCCGCCACTACGCCAATCTCAAGGGCTACGGCGAACACGAGGCGGCGGCCACGGTAGCCATCGCCCGCAACGAGGACGGCCACTACGTGGTGTCCG CCGGCAACCTGGTGGAACGCGACGACGGCCAGAGCCTGGTGCGCAGCATCCAGGCCATCGCCAACCTCGACAAGGCCGCCCTCAAGGCCGCCTACAAGGA GCAGCTACGCCGCCCGCGCGACAGCGGCTGCGCCAGCGGAGCCGGTCTCGGCCTGCTGGACATCGCCCGCAAGTCCAGCGAACCACTGGCCGCATCGCTG
|
|
Amino Acid Sequence |
>histidine kinase
MAANWGLRGKSVVALLLACALALVPAVLLGWRAMDDIRTHFGLAYAKNFTLLHRQKILAPVSRELALSRRFAESVVTRDWLLKEDDPARRALFFREAEGY RGDFRDHAYFIIASGSQHYYFNDGSQPYSERPRYTLEAGDPEDAWYFNTLRNSAAYNINVNVDSKLNLTKVWFNLVIRDQGRPIGLAGSGLDLSGFLDDF IIAREPGVTPMIVGDDGAIQAHPDRRLIAYSSAAGGASERHRVFDLLDQPEQRDALREAMRLARAKAGSVHCLWAGLDGRQQLFAVAYIPQLRWYVLTAV DLHAAQVLDNRWLWPLAGTFLLLLVALLLGFAYAVERLLLRPLRSLKRSAKAIAAGRYDTPLPLARQDEIGSLSKAFASMADQVRRHTAELEDKVQERTQ ALEEANREMAAAQKKIGDSLDYASLIQRAILPDRQLSATLGEHHFILWKPRDVVGGDFYVYREQADGYLIGVVDCAGHGVPGALMTMLARAAIDHAIEAV GSRDPAAILGETDQAMRSMLSQEQIPQALATNMDAGLVWVDRRRRQLAFAGAKISLYASDGEEVQELKGARRAIGDKRRGDYRNIEVPLAPGWTFYLSTD GFLDQAGGEHGFGFGSRRFADMLRDHARQPLPEQAEAFVATLAEYQGEHPQRDDITILSFRFD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|