Strain | Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCCGGCCGACGCCTCCCTGCACGACGCTGTGAGCCATCTCTATCAGGACCACCATGGCTGGCTGCAAGGCTGGTTGCGGCGACGCCTGGGCTGCGCGG AAAACGCCGCCGACCTGGCCCAGGACACCTTCGCCCGCCTGCTCGCCTCGCGCCGGGTACTGGATGCGCGCGAACCGCGCGCCTACCTGACCACCGTCGC CAAGGGGCTGATGATCAACTGGTTCCAGCGCCAGTCGCTGGAGCGCACCTACCTCGATGCCCTGGCCAACCTCCCGGAAGACCTCGCGCCGCCGCCGGAA CAGCGGTTGATGGTGCTGGAAACCCTGCATGAAGTAGACGCCCTGCTCGGCAGCCTGCCGGACAGGGTCCGCCAGGCGTTTCTCCTGGCGCAGATCGAAG GCCTGAAGTACGAAGCCATCGCCGAGCGCCTGGGCGTGTCCCTGGGCTCGGTCAAGCGCTACATGCAGCAGGCCTTCCGCCAGTGCCTGGAGCTGATGGA
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DNA Sequence for Gene |
>Q058_06054
ATGAATTCCGCGGGCGAAGGCCGGATTCCCTCACCGATCCTCGACGAGGCCGCCGAGTGGCTGGTGCGCCTGCAGGACAGCGGCTGCACCGACGACACGC GCCAGGCGTGCGCCCAGTGGCGGCAGCGCAGCCCACAGCACGCCCATGCCTGGGAGCGCGCCGAGCGCCTGCTGCAATGCCTCGGCCGACTGCCGCCGGC GCTGGCCCTGCCGACCCTCGGCCGCGAGCGCGGGCTGGACCGGCGGCGCGCGATCAAGCACCTCGCCCTGGTCCTCGGCGGCGCCTCGCTGGGGCTCGCC ACCTGGCAGGCCGAACCGTTGCGCGACTGGCTGGCCGACCAACGCACCGGCGTCGGCGAACAGCGCCGCCTGACCCTGCCCGACGGCAGCCTGCTGACCC TGAACACCGACAGCGCCGTGGACCTGGCCTTCGACGCCAGCCAGCGGCTGGTACGCCTGCTGCGCGGCGAGATCTTCGTCGATAGCCGCGCCGACCCGCG TCCGTTCCGCGTCGCCACCGCCGAAGCGCGGCTGCATGCCGGTGCCGCCCGCTTCAACGTACGCCAGGAGATGGCCGCGACCCGGGTCGCGGTACTCGCC GGGCGGGTCGAACTGAGCCCGCTCCACGGACGCGGGCGCTGGCTGGAAAGCGGCGAGTCGGTGCGCCTGGGCACCGACGGCGAAGCGCGCCGGCTGGCCT TCGACGGCCTGCCGGACGCCTGGACCCGCGGCATGCTGATGGCCGACCGGATGCCGCTGGCCGAGGTGCTCGCCGAACTCGCCCGCTACCGTCGCGGCTT GCTGCGCTGCGACCCGCAACTGGCCAGACTGGCGGTGTCGGGCGCCTATCCGCTGCTGGACCTGCGGCGCACGCTGGGCATGCTGCAGGCCACCTATCCG CTGAAGGTGCGCGGGGTGACCGACTACTGGATCAGCCTGGTGCCGGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGCGTGGCCGCCATCCCCGTGGCAAGCGCCCCTCGCGTCCACCCCGGCAGGCCGTCCGCCGCTGCGCCGGAACAGGCGTTGCCATCGACATACCGTGCT CCGCAGAAAAATAACCGCTTCGACCTGAGACCTTTTTCCTTCTCGGCTGGCAAGTAGAGGAATCCGCCCCGACCCAAGGTCCGCAGAGACCACGAGGAAC CCTGTACATGCCCGTACGCACGCTTCGCCCCCGTTCGCTGTCCCTGGCCATCCACGCCGCCGCCATGACCCTCGCCCTCGCCGGCGCGGCCCCCGCCCTG CTTGCCGCCGAGGCGCCCGCCGCCAGCTCGGCGCGCACCTATGACATCGCCCCCGGCCCGCTCGGTCGCACCCTGTCGGCCTTCGCCAGCGACAACGGGG TGTCCCTGGCGTTCGACCCGGTGCTCACCGAGGGTCGCCGCAGCGCCGCCCTGCGCGGCCGCTACGCGCCGGTCGAGGCGCTGCACCGCCTGCTGCTGGG
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Amino Acid Sequence |
>transmembrane sensor
MNSAGEGRIPSPILDEAAEWLVRLQDSGCTDDTRQACAQWRQRSPQHAHAWERAERLLQCLGRLPPALALPTLGRERGLDRRRAIKHLALVLGGASLGLA TWQAEPLRDWLADQRTGVGEQRRLTLPDGSLLTLNTDSAVDLAFDASQRLVRLLRGEIFVDSRADPRPFRVATAEARLHAGAARFNVRQEMAATRVAVLA GRVELSPLHGRGRWLESGESVRLGTDGEARRLAFDGLPDAWTRGMLMADRMPLAEVLAELARYRRGLLRCDPQLARLAVSGAYPLLDLRRTLGMLQATYP LKVRGVTDYWISLVPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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