Strain | Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCGTCCACCAGCACCAGGGTGTGCTCGCTGGACATGCCGCGAACGCTGATGCCCCGCCGGGACATGCCGACGCCGTTGAACTGCAGGCTTTCCGAGCC GCGCAGGGCTTCCTGCAGGTCGCGCACCGGGCGCCGCCGCAGGTCCTCGGCGGCGATCAGCGAAACGCTGGCCGGGGCGTCGCGCAGCTTGCGCTCGGTA GTGGTGGCGCTGACCACCGTCGGCTCCAGGTCGACCGGCGCGGCCAGCGCCAGGCAGGGAAACAGGTAGAGGAACGGCACGGCGCGGGCCAGCCGCAGCG GAGGAAGACGGTGCGGGGAGGAATGGGGGGTCATGGTCGGCAGGTATGAATTATGAATATTTATAAGTTATAACATAACATTTCCTCGAATGAAGAATGC CCGCCGTTTCTTCTTCATCGAGGCGAGGGAACGTCTCGCTCGCCGTATCCCTCGAAGCACAGGACCCCACTCTCAACCGGGCATGCCCCTAGGAGGAAAG
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DNA Sequence for Gene |
>Q058_06042
ATGACCGCAACCGAGCAGATCATGGCGCTCCTCGAACGCTGGGACCGCCAGCAGGAGGGCTACATCCGCCAGCGCGAGGAGCGCTACGAGGCGATGTTCC AGTTGCTCGAAGACCTCTTCGGCCGCGACGGGCGCTTCACCGCCATCGACGCCGCCTGCGGCCCGGGCTCCCTCGGCCGGCGCCTGCTCGAACGCTTCCC GGCAGCGCGGGTGGTGGCGCTGGACGCCGACGTCATGCTGCTGGAGATCGCGCGTACGGCGCTGGCCGGTTTCGCCGAGCGGGTCCGCGTGGTGGAGTGC GACCTCACCGATCCAGGCTGGACCGAACGGGTCGCCGAAGCGCGCGAGTCCCTCGCCGGCGAACGGCCCGCGGCGCTGCTCTCTTCCACCGCGTTGCACT GGCTGTCGCCCGCCGAACTCGCCGGGTTCTACGCCCAGGCCGGCGAGCTGCTCGCCCCCGGCGGCGTGCTGCTGAACGCCGACCACATGCGCTACGACCG ACGCTGGCCGGGACTCGCGGAATTGTCCCGGAAGCACCGCGAGCGGGTCCTCCAGGCTTCCGTGGCCAGCGGCGCGGACAGTTGGGAAGACTGGTGGCAA CGCGCCGCGCAGATCCCCCGGCTGGCCCCGCTGAAGGCGCAGCGCGACACCCATTTCGCGCGGCGCCCGCTCAGGCGCGCCAGCGAAGACGAAGACTGCT CGCTCGATTTCCATCTCGCCGCCCTGCGCCAGGCGGGCTTCGCCGAGGCCGCCACGGTCTGGCAGCAGTTGGACAACTACGTGGTCTTCGCCCGCCTCGC CCAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TACGCCGTCACCCGGGCACGGGGAATACCTCCAATGGAACCCGGGCAATCCGCCGGACGTTGACGCAGATCAACGCCGGCTCGGCGTCGCTCGCCAGAAT CCACAACATCTTGTTGTTTTGCAAAATCAAAACACATCATGTTGTGGAGAAATTGAAATGACCCAGCCCCGGAAGGCTACCTGGCCGGCCACCCTGCTCA AGCGCAACGGACGTGAAGTCCCCTTCGATCCCGGCAAGATCGAACGCGCCATCGCCGCCGCCGGCCAGGCCACCGGCGAGTTCGACCCGCAGCAGGCGCA GGCGCTCGCCGAACGCGTGGTGGAACGCCTGCCGGAGCGCGCCTGCCTGGATATCGAACGGGTCCAGGACCTGGTCGAACGGGTGCTGATGGAGGCCGGC CACTACCCCACGGCGCGCGCCTACGTGGTCTACCGCGAACGCCATGGCCGGCTGCGCCGCGAGCGCAAGACCCTGGTAGACGTCGCCGCGTCGATGAACG
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Amino Acid Sequence |
>hypothetical protein
MTATEQIMALLERWDRQQEGYIRQREERYEAMFQLLEDLFGRDGRFTAIDAACGPGSLGRRLLERFPAARVVALDADVMLLEIARTALAGFAERVRVVEC DLTDPGWTERVAEARESLAGERPAALLSSTALHWLSPAELAGFYAQAGELLAPGGVLLNADHMRYDRRWPGLAELSRKHRERVLQASVASGADSWEDWWQ RAAQIPRLAPLKAQRDTHFARRPLRRASEDEDCSLDFHLAALRQAGFAEAATVWQQLDNYVVFARLAQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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