Pseudomonas aeruginosa BL04, Q058_05824

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCAGCCCATCGCCCGGATGCCCGCCGTTGCGCACCGCGCGCGCAACAGGAGCGCCTGTGGACAATCGAGGACAGCCTTCGGGAACAGCCTATGGCAGGC GTTCGTCAAGCATCGGGAAAGTGCACTCTTCCAATTCGAAAATTAATTGTATAGCGCCGTTCATTCATTTCGTGGATGACGTTTTTATTATAAGTCCAAG CTGGCGAAGACCGGCAAGGGAGACCGGGAAACCAGAGTCTCATAGTCGGAAATACGACTATTGCAATATCGTCGGATAGGAGGAAGAAGCTGCGAAACGA GGCAATCCGCCAAAAGACGGGCACTCGAACGGATTTATAAGTCCGCCGTTCGGCGTTCACCTCGACGCCTGTGCACGGGATACTTATATCGGTGGTTCGC ACCACTAATTATCGATTTGAACTCGTTCGAGTCTTTACCGCGATCCCGGCCGAAATAAAAGGCGGGTGGACGATTATTGTCTCACACAAGGAACATAGGC
DNA Sequence for Gene
>Q058_05824
ATGACCAGAACTTCGAGCCCATGCGCAGTGGTATTGGCTTTTGCGGCGATTGCCGCGTCGGGGACCGCGATGGCGGCAAACACTATCACATTCAGCGGCG AAGTGACCGACCAGACCTGCCAGGTCGCGGTCAACGGCTTCACCGACCCTACGGTGATCCTCGATAGTGTGCCGGTGAGCGCCCTCGATGGCGCAGTGGG CCGCAGCGCCGGCGAAACCGCCTTCACCCTGCAACTCACCGATTGCGTCGCGCCGACGGCCGACGAGCACTTCACCACCCTGTTCCAGGCCACCAACCCC AGCGCCGCCGGGAACCTGGTGAACACCGCGGCCAGCGGCGCGACGGGCGTGGCGCTGCAACTGCTCGACGGCGTCGGCGGCAACCCGGTCGACCTGGCCG GCGGCGCGGCGGTGTCCGCCGGCGATATCGTGCTCGCCAACGGAGCCACCAGCACCAGCTACGACTACGCGGTGCAGTACGTCTCCGAAGCGGCGACCGT GACGGCCGGTCCGGTCCTCGGCGCCGTGACCTACACGCTGCGTTACGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGCCGGCGGCGCCTGCGCCGCCGCTTCCTTTTTCCCTGCACTCAAGCCGGGTCCGGTCGCTGGACCGTACCCGGCCAGGTAAGCCGCATGCCCAGACAT TCGTACCGATCCGGCAGGACATCGGCGCTTCTGCTCGTCCTGCTGGCGAGCTTCGCCCAGGCACGGGCCAGCGTGGTGGTGACCGGAACCCGGGTGATCT ACCCCGGCGAGGCGCGGGAGAAGACCGTGCAACTGAGCAATCGCGATGCGTTTCCCAACGTGGTCCAGGCCTGGGTCGACATCGATGCCCCGGACGCGCC GCCGGACCAGGCGGACGCGCCGTTCCTGGTCAACCCGGCGGTGTTCCGCATGGCCCCGGACAGCGGCCAGACGCTGCGCATCGTCTACACCGGGCAGGGC CTGCCGGGCGACCGCGAATCGCTGTTCCATCTCAACGTCCTGCAGATCCCGCCACGCAACAACAGCCATGCGGACAGGAACCAGATGCTGCTGATGCTGC
Amino Acid Sequence
>fimbrial subunit CupA1
MTRTSSPCAVVLAFAAIAASGTAMAANTITFSGEVTDQTCQVAVNGFTDPTVILDSVPVSALDGAVGRSAGETAFTLQLTDCVAPTADEHFTTLFQATNP SAAGNLVNTAASGATGVALQLLDGVGGNPVDLAGGAAVSAGDIVLANGATSTSYDYAVQYVSEAATVTAGPVLGAVTYTLRYE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site