Strain | Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTGCGCCGCGAGGAACCCGGCACGCGCCTCACCGTGTTGCAGTCGGCGGTGGCCGCGCGCGCGGAAACGCTCAGCGAAGAGCGTGTGATCAAGGAAGGC CAGCAGGTGCTGATCCTGCCGCAAGGCCTGCAGGCCAGCGAAGCGGCCCCGGCCCTGGCCGGCGCCTGGGCACAAGGCATGCTGGTGGTGGAGAACGCCC GGCTGGCCGACCTAGTGGCGGAACTGGGGCGCTATTCGCCGGCGCTGCTGCGGGTCGACCCGAGCATCGCCGACCTGCGCGTCACCGGCAGTTTCCCGCT GAAGGACACCCGCCTCGCCCTTCAGGCTTTGGAGCCGAGCCTGCCGGTGCGCAGCGTGAGGCACAACGCCTGGTGGTTCGAAGTGGTGCCACGCTGAACC GAACGGGCCGGCGAAAAATTTTTCCCGCCGGCCCTATCACTTTTTCCGACTCGTCCGGCAAGGAGGCATTGAGACTCGTTTCCATCCAGGAGCCCCGCAC
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DNA Sequence for Gene |
>Q058_05036
ATGCCCCGCCCGACGTTCCGTCCCGGCCTGCTCGCCCTAGCCATCGCCCTCGCCGTTCCCGCACCGTTCCTCCACGCCGCCCCGGCCGAACAGGCCAGCG TGCGCGACTACCGCATCGCCGCCGGGCCGCTGGCAGGCACCCTGAACCGCATCGCGGCCCAGGCCGGCCTGGTCCTCACCCTGGATCCGGCGCTCGCCGA AGGACGCAGCGCCCACGCCGTGCAAGGTCGCTTCGACGCTCCCGGCGCATTGCGCGAAGCGCTCAAGGGCAGCGGCCTGGAACTGGTGGAAAATGCCGGC GGCACCTACAGCCTGCGCAAGGTGCCGGAAGACACCCTGTCGCTGCAGGCGATGACGGTCAGCGGCGCCGAGGAAGACCCACTGGGGCCGACCAGCGGCT ACGTGGCCAAGCGCAGCATGACCGGGACCAAGACCGATACGCCGATCCTCGAGACCCCGCGCTCGATCTCGGTGGCGACCCGCCAGCAGATGACCGACCG CGCCGTGCACAACCTCGACGACGCGGTGCGCTACATGCCCGGCGTCGTTGCCAGCAGCTTCGGCAGCGACACCCGCTCCGACTGGTTGAAGGTGCGCGGC TTCAAGCCGACCCAGTTCCTCGACGGCCTGCCGATGGCGGTCGGCGTCTACAACAACCCGAAGCTGGAAACCTGGAACCTGGAGCGTGTCGCCCTGTTGC GCGGCCCGGCCTCCTCGGTCTACGGCCAGACCCCGCCCGGCGGCATGCTCGACATGGTCAGCCTGCGTCCGCAGAACGTCGCCAGTCACGAGGTGAAGGC CGAGGTCGGCAACTACAACCACAAGCAGGTCAGCTTCGACAGCACCGGCCCGCTCGACGACGAGGGACGCTTTCTCTACCGCGTCTCCGGCGTGGTGCGC GACAGCAACACCCAGGTCGATCATATCGACGACAAGCGCTACAACATCGCCCCGAGCCTGACCTGGAACATCGACGACGACACCAGGCTGACCTTCCTCG GCCAGTTCAACCGCGACGATACCGGCATCACCAGCCAGTTCCTGCCGCTGCGCGGAACCAAGTACGACGCGCCGTTCGGCAAGGTTTCCCACCACAAGAA CCTCGGCGATCCGGACTGGGAATACTACGACCGCACCTACTACTGGCTGGGCTACGCCTTCGAGCGGCGGATCAACGATGTCTGGCAGTTCCGCCAGAAC CTGCGTTACCTGCGCAACGACCTGTCGTTCCAGGGGATTACAGCGGGCACAGCTCATGCCGACGGCACACTGGAACGCAGCACCACCTCGGTGGATGAAG ACGTCAGTCAGTTCGTAGTAGATAACAACTTCCAGGCCGACTTCGAAACAGGCGCCCTGCGCCACACCCTGCTGCTGGGCCTGGACCACAACCGGACCAC CAACGAATACACCTCGATCTTCGGCTTCAATGTACCGCCGACCAACATCAACAACCCGATCTACGGCCAGCCGATTCCCAAGCCGCCGCGTTCCGACGCG TACTACGACTACAAGCAGCAGACCTACCAGACCGGCCTCTACGTCCAGGACCAGATCGCCCTCGACAACTGGCGCCTGACCCTCGGCGGTCGCGAGGACT GGGTGCACACAGGCGCCACCTTCTACAACAAGGGCGACGCCACCAATACCAGCCGCGACAAGAAGTTCAGCGGCAACGCGGCGCTCAGCTACATCTTCGA CAATGGCGTGGCGCCCTACATCTCCTATGCGGAGTCGTTCCAGCCCACCACCGGCGCCGATATGAACAGCACCAGTTCGCTGAAGCCGACCGAAGGCAAG CAATGGGAAATCGGCGTGAAGTACCAGCCGGTGGGCTCCGACTCGCTGTTCACCGCCGCGGTCTATGACCTGCGCCAGGAGAACGTCAGCGTGTCGCAGA ACATAGGCGGCACGCCGGTCACTTCGCAGACGGGCGAAGTGAAGGTCTCCGGGATAGAACTGGAAGCCACCAGCAACGTCACCGAAAACCTGAAGATGAT CGGCGCCTATAGCTACGCCGACACCGAAGTGAAAAAAGGCCAGTACGCAGGCAACCGCCTGCAACAGGCGCCGCGCAACCAGGCCTCGCTATGGGCCGAC TACACCTGGCACGAGGGTACGCTGAACGGTTTCAGCGTGGGTGCCGGCGCCCGCTACGTAGGCTCGACCTACGGCGACCAGGCCAACACCTACGACGGCT ACGCCGGCTCGTACACCCTGTACGACGCCGCCGTGCGCTACGACCTGGGCCAATTGAACGGCAGCCTGAAAGGCGTCAGCGTGGCGGTCAATGCCAACAA TCTGTTCAACAAGGACTACCTGGCGTCCTGCGACGGCTACTACTGCTACTACGGCGACCAGCGCAGCGTGGTGGGCAGCGTCAGCTACAAGTGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGACGCGTCACAGGTGCGCAACGGCGGATAACCGCTTCGCGGTTATCCGCCCTACCGCAGAACGTACCTTCCGGGCACCGGATGCCCTCCTCCCGCCTG TGGGAGAGGGCCGGGATATCGGCAGCCGGCGCATCGGGGAGGACCTGTATTCCGGGCGCCGGAGATCGTCGTTCACCCCGCGATCCGACCCCACAGCGCG CTGGCGTCGTCGTGGATCTTGAAACGCGGGAAAGCCAGGGCCTGGTCGTCGCCCTGTTCGATCTCGCGCAACTCGTCGAGCATGGCGCTCACTCCGACGT CCTCGAGGCGCCGCAGCAACTGTTCGTCGGTATAGCGGCGGAAAGGCTCGACCAGCCGGTCGAAGCCGTCGGTCATCAGCACGAAGGAACGCAACGCGGC GAGCGGCAAGGTCTCGCGCTGCACCTGGCCGAGCCAGCGGTCGCTGATGTCCAGCGCCCAGTAGCCCTCGGGCTTGTTCATCAGCAGGCGGTTCTGCCGC
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Amino Acid Sequence |
>hydroxamate-type ferrisiderophore receptor
MPRPTFRPGLLALAIALAVPAPFLHAAPAEQASVRDYRIAAGPLAGTLNRIAAQAGLVLTLDPALAEGRSAHAVQGRFDAPGALREALKGSGLELVENAG GTYSLRKVPEDTLSLQAMTVSGAEEDPLGPTSGYVAKRSMTGTKTDTPILETPRSISVATRQQMTDRAVHNLDDAVRYMPGVVASSFGSDTRSDWLKVRG FKPTQFLDGLPMAVGVYNNPKLETWNLERVALLRGPASSVYGQTPPGGMLDMVSLRPQNVASHEVKAEVGNYNHKQVSFDSTGPLDDEGRFLYRVSGVVR DSNTQVDHIDDKRYNIAPSLTWNIDDDTRLTFLGQFNRDDTGITSQFLPLRGTKYDAPFGKVSHHKNLGDPDWEYYDRTYYWLGYAFERRINDVWQFRQN LRYLRNDLSFQGITAGTAHADGTLERSTTSVDEDVSQFVVDNNFQADFETGALRHTLLLGLDHNRTTNEYTSIFGFNVPPTNINNPIYGQPIPKPPRSDA YYDYKQQTYQTGLYVQDQIALDNWRLTLGGREDWVHTGATFYNKGDATNTSRDKKFSGNAALSYIFDNGVAPYISYAESFQPTTGADMNSTSSLKPTEGK QWEIGVKYQPVGSDSLFTAAVYDLRQENVSVSQNIGGTPVTSQTGEVKVSGIELEATSNVTENLKMIGAYSYADTEVKKGQYAGNRLQQAPRNQASLWAD YTWHEGTLNGFSVGAGARYVGSTYGDQANTYDGYAGSYTLYDAAVRYDLGQLNGSLKGVSVAVNANNLFNKDYLASCDGYYCYYGDQRSVVGSVSYKW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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