Strain | Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCCTTGCCGCGACCAACCGCGACCTGGGCGCGATGGTCGCCCAGGGCCAGTTCCGCGAGGACCTGCTCTACCGCCTCAACGTGATCGTGCTCAACCTGC CTCCCCTGCGCGAACGCGCCGAGGATATCCTCGGCCTGGCCGAACGTTTCCTCGCCCGCTTCGTCAAGGACTACGGCCGCCCCGCCCGCGGCTTCAGCGA AGCCGCACGCGAGGCCATGCGGCAATACCCCTGGCCGGGCAACGTACGCGAGCTACGCAACGTGATCGAGCGCGCCAGCATCATCTGCAACCAGGAACGG GTGGATGTCGACCACCTCGGTTTCAGCGCTGCGCAATCCGCCAGCAGCGCGCCGCGGATCGGCGAATCGCTGAGCCTGGAAGACTTGGAGAAAGCCCATA TCACGGCGGTGATGGCCTCCAGCGCGACCCTCGACCAGGCCGCCAAGACCCTCGGTATCGATGCCTCGACCCTGTACCGGAAGCGCAAGCAGTACGGCCT
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DNA Sequence for Gene |
>Q058_04509
ATGAGCATGCCGCTGCCGATGAAGCTCCGGACCCGGTTGTTCCTCAGCATTTCCGCGCTGATCACCGTCTCGCTGTTCGGCCTGTTGCTCGGGTTGTTCA GCGTGATGCAGCTCGGCCGCGCTCAGGAGCAACGGATGTCGCACCACCACGCGACCATCGAGGTGAGCCAGCAGTTGCGCCAGCTGCTCGGCGACCAGTT GGTCATACTGCTCCGCGAAAAACCCGACGGGCAGGCCCTGGAGCGCTCGCAGAACGATTTCCGACGGGTCCTGGAACAGGGTCGGGCGAATACCGTCGAC GGCGCCGAGCAGGCCGCCCTGGATGGCGTTCGCGACGCCTACCTGCAACTGCAGGCGCACACCCCGGCGCTGCTCAAGGCGCCCATGGCCGACAACGACG GCTTCAGCGAAGCCTTCAATACCCTGCGCCTACGCCTGCAGGACCTGCAGCAACTGGCGCTGGCCGGCATCAGCGACGCCGAGACCAGCGCCCGCCACCG AGCCTACCTGGTCGCCGGCCTGCTTGGCCTGGTGGGCGTCGCCATCCTGCTGATTGGTTTCGTCACCGCCCACAGCATCGCCCGACGCTTCGGCGCACCG ATCGAAACCCTGGCGCGGGCGGCGGACAGGATCGGCGAAGGCGATTTCGACGTGACCCTGCCGATGACCAACGTCGCCGAGGTCGGCCAGTTGACCCGGC GTTTCGGCCTGATGGCCGAGGCCCTGCGGCAGTACCGCAAGACCAGCGTCGAAGAGGTGCTTTCCGGCGAGCGGCGCCTGCAGGCGGTACTCGACAGCAT CGACGACGGCCTGGTGATCTTCGACAACCAGGGGCGCATCGAACACGCCAACCCGGTCGCGATCCGCCAGCTGTTCGTCTCCAACGACCCCCATGGCAAG CGGATCGACGAAATACTCAGCGATGTCGATGTCCAGGAAGCGGTGGAAAAGGCCCTGCTCGGCGAAGTCCAGGACGAGGCGATGCCTGACCTGGTGGTGG ACGTCGCCGGTGAGTCGCGCCTGCTGGCCTGGTCGCTGTATCCGGTCACCCATCCCGGCGGGCATAGCGTCGGCGCGGTGCTGGTGGTCCGCGACGTGAC CGAGCAGCGCGCCTTCGAACGGGTCCGCAGCGAATTCGTCCTGCGCGCCTCCCACGAACTGCGCACGCCGGTGACCGGCATGCAGATGGCCTTCAGCCTG CTCCGCGAACGCCTGGACTTCCCCGCGGAGTCGCGGGAAGCGGACCTGATCCAGACGGTGGACGAAGAGATGTCGCGACTGGTCCTGCTGATCAACGACC TGTTGAACTTCTCGCGCTACCAGACCGGCATGCAGAAGCTCGAACTGGCGTCCTGCGACCTCGTCGACCTGCTCACCCAGGCGCAGCAGCGTTTCACTCC CAAGGGCGAGGCCCGCCGGGTCTCGCTGCAACTGGAGCTGGGCGATGAACTGCCGCGCCTGCAGCTCGACCGCCTGCAGATCGAGCGGGTGATCGACAAC CTGCTGGAAAACGCCCTGCGCCATAGCAGCGAAGGCGGGCAGATCCACCTGCAGGCCCGGCGCCAGGGCGACCGGGTGCTGATCGCGGTGGAAGACAATG GCGAAGGCATTCCCTTCAGCCAGCAAGGACGGATCTTCGAGCCTTTCGTCCAGGTCGGACGCAAGAAGGGCGGCGCCGGCCTCGGCCTGGCGCTGTGCAA GGAAATCATCCAGCTGCATGGCGGGCGCATCGCGGTGCGCTCGCAACCGGGCCAGGGCGCGCGCTTCTACATGCTGCTGCCGGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGGGCCGCTCCCGGCAGGCTTTTCCACAGGCCTCAGGAAGTCGGCACCGCCAGCAGCAGCGCGGCGGTTTCCAGGTCCGGCTCGCCATCGAAGCGGGC CGGACGGTATTTCATCTGGAAAGCGCCGATGACGTCGCGGGTGTCCTTCTCCAGCTCGCCGGTCTGCGGCACCAGGTAACCGTGCCGCGCCAACTGCTGC TGGAACCAGCGCACATCCGGCAGCTGGCCGTTCAGTTCGGCGAGCCGGCGCGCCAATTCGCCGGGCTTCGGCCAGGGCACCAGGCCGGCGTCGGCGAGGC GCTTCCAGGGGAACAGCGGACCCGGATCGACCTTGCGGCCCGGCGCGATATCGCTGTGTCCGATGATCCGGTCCGGGGTGATGCCGTGGCGCTTGGCGAT GTCCTTCAGCAGGGGGATCAGCGCCTGGATCTGCGCTTCGCTGAACGGATACCAGACCCGCCCCTGGGGTGTATCGCGATAGCCCTGGTTGACGATCTCG
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Amino Acid Sequence |
>histidine kinase
MSMPLPMKLRTRLFLSISALITVSLFGLLLGLFSVMQLGRAQEQRMSHHHATIEVSQQLRQLLGDQLVILLREKPDGQALERSQNDFRRVLEQGRANTVD GAEQAALDGVRDAYLQLQAHTPALLKAPMADNDGFSEAFNTLRLRLQDLQQLALAGISDAETSARHRAYLVAGLLGLVGVAILLIGFVTAHSIARRFGAP IETLARAADRIGEGDFDVTLPMTNVAEVGQLTRRFGLMAEALRQYRKTSVEEVLSGERRLQAVLDSIDDGLVIFDNQGRIEHANPVAIRQLFVSNDPHGK RIDEILSDVDVQEAVEKALLGEVQDEAMPDLVVDVAGESRLLAWSLYPVTHPGGHSVGAVLVVRDVTEQRAFERVRSEFVLRASHELRTPVTGMQMAFSL LRERLDFPAESREADLIQTVDEEMSRLVLLINDLLNFSRYQTGMQKLELASCDLVDLLTQAQQRFTPKGEARRVSLQLELGDELPRLQLDRLQIERVIDN LLENALRHSSEGGQIHLQARRQGDRVLIAVEDNGEGIPFSQQGRIFEPFVQVGRKKGGAGLGLALCKEIIQLHGGRIAVRSQPGQGARFYMLLPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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