Strain | Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCTGGGAGGAGCTGTCCTCGGCGCGCTACGAGCTGCGCCACGCCGAGATCCGCGCGCCGGTCAGCGGCTACGTGGCCGGCTTGAAAGTGTTCACCGATGG CGGGGTGATCGGCCCCGGCGAATTGCTGATGTACATCGTGCCCAACAGCGACAGCCTGGAAGTGGAGGGCCAGCTCGCGGTGAACCTGGTCGACCGGATC CACAGCGGGCTGCCGGTGGAGATGCTGTTCACCGCCTTCAACCAGAGCAAGACCCCGCGGGTCACCGGCGAAGTGACCATGGTCAGCGCCGACCGCCTGC TCGACGAGCAGAACAAGCAGCCCTACTACGCGCTGCGCGCCCAGGTCGACGCGGCCGCGATGGGCAAGCTGAAGGGCCTGCAGATCCGCCCGGGAATGGC GGTGCAGGTGTTCGTCCGCACCGGCGAGCGCTCGCTGCTCAACTACCTGTTCAAGCCCCTGTTCGACCGCGCCCACGTGGCGCTGGCGGAGAATTGACCG
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DNA Sequence for Gene |
>Q058_03146
ATGACCATGCGCCGCCTGATGACCTGGCTGTTCGGCGCCTTCCTGTTGCTGCTGCGCGAGGACGCCTTCGCCCTCGGCCTGCTGGACGGCTATCACCTGG CCCTGGAGAACGACCCGCAGTTCCAGGCCGCGATCCAGGAGCACGAGGCCGGCAGGCAATACCGTGCGCTCGGCCGCGCGGCGCTGCTGCCGCGCCTGGT GTACAGCTACAACCGTGGGCGCAGTTGGTCCGATGTGACCCAGGCCACCACCCGCGGCGATTTCAAGGAAGACCGCGACTACGACAGCTACGTCTCCACC CTCAGCCTGCAACAGCCGTTGTTCGACTACGAGGCCTTCAGCCGCTACCGCAAGGGCGTGGCCCAGGCGCTGCTGTCCGACGAGCGCTTCCGCAGCCAGA GCCAGGAACTGCTGGTCCGGGTCCTGGAAGCCTATACCGGCGCGCTGCTGGCCCAGGACCAGATCGAACTGGCGCGGGCGCAGAAACGCTCCTACCGCGA GCAGTTCCAGCTCAACCAGCGCCAGTTCGAGCGCGGCAACGGCACCCGCACCGACACCCTGGAGACCCAGGCCCGCTTCAACCTGGCCCAGGCCCAGGAA ATCGAGGCGCGGGACAGCCAGGATGCCGCCCTGCGCGAACTGGAGCGGCTGGTCGGGGCGCCGCTGGAGATCGCCGACCTGGCGCCGCTCGGCGAACGCT TCCAGGTGCGCCCGCTGAGCCCCGCCAGCTACACCGCCTGGCGCGACCTGGCGCTGGCCGAGAATCCCGAGCTGGCCTCGCTGCGCCACGCGGTGGACGT GGCCCGCTACGAGGTCGAGCAGAACCGCGCCGACTTCCTGCCGCGCCTGGGCCTGTACGCCAGCACCGGGAAGTCCAAGTCCGGTTCGGAGAACACCTAC AACCAGCGCTACGAGACCGACAGCGTCGGCATCCAGTTGAGCGTTCCGCTGTTCTCCGGCGGCGAGACCCTGGCGGCGACGCGCCAGGCCACGCATCGCA TGGAGAAGAGCCATTACGACCTGGACGACAAGGTCCGCGAGACCCTCAACCAGGTGCGCAAGATGTACAACCAGAGCAGCAGCAGCGCGGCGAAGATCCG CGCCTACGAGATGACCGTGGATTCGGCGCGGACGCTGGTGATGGCCACGCGCAAGAGCATCGCCGCCGGGGTGCGGGTCAACCTCGACCTGCTGAACGCC GAGCAGGCGCTGTACAGCGCTATGAACGAGCTGTCCAAGGCCAAGTACGACTACCTCACGGCCTGGGCACGCCTGCGTTTCTACGCCGGGGTGCTGGACG AAGCCGACCTGGAACTGGTGGCGGCGAACTTCGTCGCCGGCGAGACGCCGGCGCGCCGCCGCGACTGCGCGACGACGGATTGCCCGGCGCCGCTGCACAC CCTGTCGAAGACCGATACGGAGGAAAACCGGAGCGCGCTCAATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACCGCGAAGGACGTGCAGGCAATTGTTCGCCTGGCGTGAAGTCGATGTCCCGGGCGGGTCGACAGAGGTCGAACAATACGCACGGAATTGTTTTTCCAA TAAGGCGCTATTTATATGAAACGGTTTTTATAATATTCCAGTGTCTTCGGTAGTTTATCTTTCCTGCATGATTTCATATATGCGGAATTCGTTCGTGCAT ATGCTTTAAGTGCGGCTTAATTTTTTTCATGAAACCTGTGGACATTGGAAAATAAGCTGTGTCAGTTTGGACTTCGGCCTGATCTGGCCGATAACTGCAA TTATCCATCCGATAATTGTATCCGAGTTATTTCCTTTACAACTTAAAGGGATATGACAATGTCCAGCAATTCTCTTGCATTGAAAGGTCGTAGCGATGCG TATACCCAGGTAGACAACTTCCTGCATGCCTATGCGCGGGGCGGGGACGAATTGGTCAATGGCCATCCGTCCTATACCGTCGACCAGGCCGCGGAGCAGA
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Amino Acid Sequence |
>alkaline protease secretion protein AprF
MTMRRLMTWLFGAFLLLLREDAFALGLLDGYHLALENDPQFQAAIQEHEAGRQYRALGRAALLPRLVYSYNRGRSWSDVTQATTRGDFKEDRDYDSYVST LSLQQPLFDYEAFSRYRKGVAQALLSDERFRSQSQELLVRVLEAYTGALLAQDQIELARAQKRSYREQFQLNQRQFERGNGTRTDTLETQARFNLAQAQE IEARDSQDAALRELERLVGAPLEIADLAPLGERFQVRPLSPASYTAWRDLALAENPELASLRHAVDVARYEVEQNRADFLPRLGLYASTGKSKSGSENTY NQRYETDSVGIQLSVPLFSGGETLAATRQATHRMEKSHYDLDDKVRETLNQVRKMYNQSSSSAAKIRAYEMTVDSARTLVMATRKSIAAGVRVNLDLLNA EQALYSAMNELSKAKYDYLTAWARLRFYAGVLDEADLELVAANFVAGETPARRRDCATTDCPAPLHTLSKTDTEENRSALN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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