Strain | Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACCCTGCTGATGCTGGCCGGTGCCTGGCAGGGGCTGCGCAGAGGACGGCGCTGGGCCTACCTCCCGGGCCTGCTCGGCCTGCTGCTGACCCTGGCCCTG GAGTGTCTGCTGTTGCTGGTGGACGACCCGCTGAACAGCATCGAGGCGCTGATCATCCTGCCCGCCGCTTGCCTGCCGCTGCTCATCGGTTGCAATTTCA GCGCCGGCGGCTCGGGGGGAGGGCGTCGGCGCGGCGGCGATTACGCTAGCTCATCGGGTTCCTCGTCTTCCTCGTCGTCGAGTTCGTCCAGTTCGTCTTC GGACTCGTTCTCCGGCGGCGGAGGCTCGAGTGGCGGCGGTGGCGCCTCCGGCAGTTGGTGATTGGCGAAAACCCTTTTTCAATCAATGAATTGAAAAGTT GGAACGGTTCCTGCAGTGACCCGCCCGACGCGCATTCCGGCGTCAAAAGTTTGTTCGGCGCCCACCTACGGGCGCCATACGCAGGGCAGGGGAGTCGAGA
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DNA Sequence for Gene |
>Q058_02928
GTGGATCGCACGCAACTGATCAGCAATGTGCGCAGCAACCTGGCGGGGCTGGGTCGCGGCAGCCTCGGCGTGCCGATCCTGCTGCTGGCCATGCTGGCGA TGATGACCCTGCCGATCCCGCCATTCTTGCTGGACGTGCTGTTCACCTTCAACATCGCCCTGTCCATCGTCGTCCTGCTGGTCTGCGTGTACGCCCTGCG GCCGCTGGACTTCGCCGTGTTCCCGACCATCCTGCTGGTGGCGACCCTGTTGCGCCTGGCGCTGAACGTTGCCTCGACCCGCGTGGTGCTGCTCCACGGC CACGACGGCCATGGCGCCGCGGGCAAGGTGATCCAGGCCTTCGGCGAAGTGGTGATCGGCGGCAACTACGTGGTCGGGGTGGTGGTGTTCGCGATCCTCA TGATCATCAACTTCGTGGTGGTGACCAAGGGCGCCGGGCGGATTTCCGAAGTCAGCGCGCGCTTCACCCTGGATGCCATGCCCGGCAAGCAGATGGCCAT CGACGCCGACCTCAACGCCGGCCTGATCGAGCAGGAGGAAGCCAAGAAGCGCCGCAGCGAGGTGGCCCAGGAGGCCGACTTCTACGGTTCGATGGACGGT GCCAGCAAGTTCGTCCGCGGCGACGCCATAGCCGGCCTGCTGATTCTCTTCATCAACCTGATCGGCGGCGTCGCCATCGGCATGATCCAGCATTCGATGT CCTTCGGCGACGCCGGCAAGGTCTACGCCCTGCTGACCATCGGTGACGGCCTGGTGGCACAACTGCCGTCGCTGCTGCTGTCGACCGCGGCGGCGATCAT GGTGACGCGGGTCTCCAGTTCCGAGGACATGGGCCAGCAGGTCAACCGGCAGATGTTCGCCTCGCCCAAGGCGCTGGCGATTTCCGCGGCGATCCTGATC GCCATGGGCGCCGTGCCGGGCATGCCGCATGTTTCCTTCATCGGCCTCGGCGCCCTGGCCGGCGCTGCCGCCTACTGGATCTGGCACCGGCAGAACAAGG CCAAGCAGGTCGCCGAGCAGGAGGTACAGCGCCAGCAGGAGCTGCTGCCGGCGCAGCGTGCCCAGGAGGTCAAGGAACTGGGCTGGGACGATGTCACCCC GGTGGACATGGTCGGCCTGGAAGTCGGCTACCGGCTGATCCCGCTGGTCGACCGCAACCAGGGCGGGCAACTGCTGGCGCGGATCAAGGGCGTACGCAAG AAGCTGTCCCAGGAGCTGGGCTTCCTGATGCCCTCGGTGCACATCCGCGACAACCTCGACCTGCTGCCCAACGCCTACCGCCTGACCCTGATGGGGGTCA GCGTGGCCGAAGCGGAGATCTATCCCGATCGCGAGCTGGCGATCAACCCCGGCCAGGTATTCGGCAGCCTCAACGGCATCGCCGGCAAGGACCCGGCCTT CGGCCTGGAAGCGGTATGGATCGAGCCCGGCCAGCGCGACCAGGCGCAGTCGCTGGGCTACACCGTGGTGGATGCGAGCACCGTGGTCGCCACTCACCTG AACCAGGTGCTGCACAAGCACGCCCACGAGTTGCTGGGCCATGAAGAAGTGCAGCAGCTCCTGCAATTGCTCGCGCGCAGCTCACCGAAGCTGGCGGAAG AGCTGGTGCCGGGGCTGATTTCCCTGTCCACCCTGCTCAAGGTCCTGCAGGCGCTGCTCCAGGAGCAGGTGCCGGTGCGCGACATCCGTACCATCGCCGA GGCCATCGCCAACGTCGCTCCACGGAGTCAAGATCCCGGCGCGATGGTCGCCGCGGTTCGCGTCGCGTTGTCCCGCGCAATCGTGCAAAGCATTGTCGGG CTTGAGCCGGAGCTGCCTGTGATCACGCTCGAGCCGAGGTTGGAACAGATTTTGCTGAACAGCATGCAGAAGGCCGGACAAGGCTCCGAGGACGGCATGT TGCTGGAGCCGGGGATGGCCGAGAAGCTGCAACGCTCGCTGATCGAGAGCGCGCAACGCCAGGAAATGCTCGGCAAGCCGGCGATCCTGCTGGTTGCCGG ACCGATCCGCTCGATGATGTCGCGCTTCGCGCGGATGGCGGTGCCCAGCATGCATGTGCTGGCCTACCAGGAAATCCCGGACAACAAGCAAGTCACCATC GTCGCGACGGTGGGGCAGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGAGGGCTGCGCTGGCTCCAGGGCCGGCACACCGGGCAACCTGAGGTTGCCGGCAAGACTACTGAACTGAGGGGTTCGGGCAATGCAAGTCAAACGCTT CTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTCCGCGACGAACTGGGTCCGGACGCCGCGATTCTCGGCAACCGCCGGGTCGCCGGCGGCATCGAG CTGACCGCGGCGCTGGATTACCAGGCCCCGCCGGCGCCGAGCAAGCCCAACCCGGCGCTGGAAGTGGAGCTGCGCAAGACCCAGGCGCGGATCGCCGAGG CGCGCGCCGAATTGACGGCGCGTCCGGCGGAAAACCAGCGCAAGGACCGTCAATTGTTCGCCGAGGAGAAGCCGGCGCGTCCGTCCCTGGCCGAGTCCAT GGCGGCGGCGCAGGCCAAGCCCCAGGCGGGCGGCCAGACCCTCGAGGCAATGCGTTTCGAACTGAACGGCCTGCGCGAGCTGATTGAGGTGCAGCTGGGT
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Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRTQLISNVRSNLAGLGRGSLGVPILLLAMLAMMTLPIPPFLLDVLFTFNIALSIVVLLVCVYALRPLDFAVFPTILLVATLLRLALNVASTRVVLLHG HDGHGAAGKVIQAFGEVVIGGNYVVGVVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIEQEEAKKRRSEVAQEADFYGSMDG ASKFVRGDAIAGLLILFINLIGGVAIGMIQHSMSFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRVSSSEDMGQQVNRQMFASPKALAISAAILI AMGAVPGMPHVSFIGLGALAGAAAYWIWHRQNKAKQVAEQEVQRQQELLPAQRAQEVKELGWDDVTPVDMVGLEVGYRLIPLVDRNQGGQLLARIKGVRK KLSQELGFLMPSVHIRDNLDLLPNAYRLTLMGVSVAEAEIYPDRELAINPGQVFGSLNGIAGKDPAFGLEAVWIEPGQRDQAQSLGYTVVDASTVVATHL NQVLHKHAHELLGHEEVQQLLQLLARSSPKLAEELVPGLISLSTLLKVLQALLQEQVPVRDIRTIAEAIANVAPRSQDPGAMVAAVRVALSRAIVQSIVG LEPELPVITLEPRLEQILLNSMQKAGQGSEDGMLLEPGMAEKLQRSLIESAQRQEMLGKPAILLVAGPIRSMMSRFARMAVPSMHVLAYQEIPDNKQVTI VATVGQN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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