Strain | Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGGGTCGTCGAAGGCGCCCTGGGAGTGGTTGGGCAGGAACTCCTTGCACATGTCGACCACGGTGCCGTCGATCTCGACCATGGTGATCCGCTCGACGCT CTTGTGCTTGGCCACCTCGCGCAGCATGCCGCCGTCGCCGCCGCCGATGATCAGCACGCGCCGGGCCGCGCCGTGGGCGAGGATCGGCACGTGGGTGAGC ATCTCGTGGTAGATGAACTCGTCGGCCTCGGTGGTCTGGATCACTCCATCGAGCGCCATCACCCGGCCCATCCGGGCGTTTTCGAAAATCACCAGGTGCT GGTGCTCGGTGCGCACCTCATGCAGCATGTTGTCGATGCTGAAGCGCTGGCCGTAGCCCTGGTACAGAGTTTCCTGATAATCGCTCATGGGCCGGGATCT CCCTGGTAAGGCTGCAATCTGGCAGCGGGACTTGCCCGCGCCGCGAAGAAAGGCGCGCATTCTACGCTGGCGGCAATGACAGGTCGAACCCCGCCGGCGG
|
|
DNA Sequence for Gene |
>Q058_02634
ATGGCGCCGGATGCGCCGGACGGGTATCGTCTGCCCATGAGCCAGCCTACCTCTCCCCTCGTCCTGCACCTGCCCTACCAGTCGCCCTGGGAATGGCGCC AGTTCCACCAGCATTTCGCCCTGCGCCTGCTCGCCGGTGTCGAAAGCCTGGGCGACGACCACTATGCCCGCAGCTTCCGGGCCAACGGCCGCCCGGCCTG GTTCGAGGTGCGACCGCTGGCGGAACGCCAGGTCCTGGCGCTGAGCCTCAGCCCGTCCGCCCATGCCCTGGCCGCCGAACTCGAGGCACGGGTCCGCCGG ATGTTCGACCTGGACAGCGACCCGGCCGCCATCGCCCGGCATTTCGCCGGGGATCCCCTGCTCGGCCCGCTGGTGGCCGCCAATCCGGGGCTGCGCCTGC CGGTGGCCTTCGACCCCTTCGAACAGGCGGTGCGCGCCATCGTCGGCCAGCAGGTCACGGTGAAGGCCGCGGTGACCATCACCGGGCGCCTGATCCAGCG CCTCGGCGAGCCGCTGGAAAATCTCGGCTACGACGGCATCAGCCACCTGTTCCCGACGCCCGCCGCGCTGGCGCAAGCCAACCTCGACGGCATCGGCATG CCCGGCAAGCGGGTACAGACGCTGCAACGCTTCGCCGCGGCGATCGCCTCGGGAGAGCTGAGCCTGGACCTGACGGACGGCCCCGAGGCGCTGGTGGAGC GCCTCTGCGCGTTGCCCGGCATCGGCCCCTGGACCGCCGAATACATAGCCCTGCGTGCCATGGGCGAAGCCGACGCCTTCCCCGCCGCCGACCTCGGCCT GCTGAAATCCACGGTCTGGGGGCCGCAAGGCATCGATGCGCGCAGCCTCAAGGCCCGCGCCGAGGCCTGGCGGCCTTGGCGCGCCTACGCCGCGATCCAC CTGTGGCACCACTACGCCGCAGGCGGCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGCCGCGGCGGGAGGCTACAGCCTGACGTTGCCGCGCGGGCCGGCGATGGCCCAGATGATCAGGCCGAGCACCGGCAGGACGATGATCACCAGGACCCAG ATGATCTTCATCCCGGTTTCCGCAGCGCTTTTCAGGATGTTGACGATGGCCCAGATATCCAGGGCCAGGATGACCAGGCTGATCAGCCCGCTGAGGGTGG AACCCATGGCGCGATGCTCCCGAGCAAGAGTGTTCCCTCAGGATAGCCGGCGCGCTCACTCCACGACGATGTCGGCGAAGCTGGCCACCGTCGGATGGCC GTCCAGGCTGCCGCCTTCGCGGGCCAGGCCGAGCGTGCGCATGCCCGCGTCGCGCGCGGCATCCAGCTCCTGCACCACGTCGGAAAGGAAAAGGATTTCC GCGGCCGGCAGGCCGATGGCCCCGGCGATCCGCGCATAGGAGGCGCTTTCCCGCTTCGGCCCGCTGGTAGTGTCGAAGTAGCCGGAAAACAGCGAGCCCA
|
|
Amino Acid Sequence |
>DNA-3-methyladenine glycosidase II
MAPDAPDGYRLPMSQPTSPLVLHLPYQSPWEWRQFHQHFALRLLAGVESLGDDHYARSFRANGRPAWFEVRPLAERQVLALSLSPSAHALAAELEARVRR MFDLDSDPAAIARHFAGDPLLGPLVAANPGLRLPVAFDPFEQAVRAIVGQQVTVKAAVTITGRLIQRLGEPLENLGYDGISHLFPTPAALAQANLDGIGM PGKRVQTLQRFAAAIASGELSLDLTDGPEALVERLCALPGIGPWTAEYIALRAMGEADAFPAADLGLLKSTVWGPQGIDARSLKARAEAWRPWRAYAAIH LWHHYAAGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|