Strain | Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGCAGGCGGTCGGGGTCGTCCTGGATGTCCTGCAGGGCCACCGCCTTGGGACAGACATGGCCGCGGCTGAAGCTGTCCTGCGGGTCGCCCTTGATCGA GCGGATCCGCGGCACGCCGCCCTCGTCGCTCTCGGTCTCGATGGCGAGCCCGCAGATGGCCTCGCAGAGATGGCACGCACGGTAGTGGAGGGTCTTGCTC ATGGCTCGCCTCTTCATTGTCGTCGCCGGCCGCCGCAGCCCGGCGCGTACGCGAGGACCAGACGACCGGTCTAGTCGTCGAATCGGCACTATGCGGCGCC TTCCGCCGCCGCGCCAGCAGCGTCAGTCGGCTGAATCGCCAGGCATCAGGCTGGCCGATGGGCGCGGTAGAGGGGAGGCGTGCCGTTTGTCCGGCTGTCA ACTATCCACCTGGGAATTCCGGCGCGGCGAAAGCCGGTGCTAAACCTTGTCTCTTCGAGTCCGCCCCTGTCCGACAAGACCAATAAAGCGTGGAGACCGC
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DNA Sequence for Gene |
>Q058_00768
ATGACCGACGCCCGCCCCTTCCGCCCTCGCCCCACCTCGTTGTCAGCCGCCCTGCTGCTGGGCGCCTGGATCGCCCAGCCGGCCACGGCCGCCTATGTCG AAACCGGTCGGCCCGGCGATCCGGCCAGTTGGCGCTCCGCCGAATACCAGCAGGACTGGGGCCTGGAACGGATGCGGGCCGACCAGGCCTATGCCGCCGG CATCGACGGCCAGGGCGTGAAGATCGGCGAGATGGACTCCGGTTTCGACCCGAGCCATCCGGATACCCCCGCCTCGCGCTACCAGCCGGTGACGGCCAGC GGCACCTATGTCGACGGCACGCCGTTCAGCGTCAGCGGCGCGATGAACGGCAACAACGACTCCCACGGTACCCACGTCGGCGGCACCCTCGGCGCCTCGC GCGACGGCGTCGGCATGCACGGGGTGGCCTACGCGGCACAGGTGTACGTCGCCAACACCAACCAGAACGACAGCTTCCTGTTCGGCCCGACGCCCGACCC GAACTATTTCAAGGCCGCCTACCAGGCGCTGGCCGACGCCGGGGTGCGGGCGATCAACAACAGTTGGGGCAGCCAGCCCAAGGACGTCAGCTACGAGACC CTCGACGGCCTGCACGCCGCCTATGCCCAGCACTACGGGCGCTCCACCTGGGTGGACGCCGCCGCCGGCGTCTCCCGCCAGGGCGTGATCAACGTCTTCA GCGCCGGCAACAGCGGCTACGCCAACGCCAGCGTGCGCTCCGCCCTGCCCTACTTCCAGCCGGACCTGGAAGGCCACTGGCTGGCCGTGTCCGGCCTCGA CCAGCAGAACGGCCAGCGCTACAACCGCTGCGGCATCGCCAAGTACTGGTGCATCACCACGCCCGGCCGCCTGATCAACAGCACCATGCCCGGCGGCGGC TACGCCAACAAGTCCGGTACCTCGATGGCCGCGCCCCACGCCACCGGCGCGCTGGCCCTGGTCATGCAGCGCTATCCGTACCTGAACAACGAGCAGGCGC TGCAGGTTCTGCTGACCACCGCCACCCAGCTCGACGGCACGCCGACCGGCGCCCCCACCGACACCGTCGGCTGGGGCGTGCCGGATCTCGGTCGGGCGAT GCATGGGCCTGGACAATTGCTCGGCCGCTTCGAGGCCAACCTCCCGGCCGGCCTGCGCGACGAATGGAGCAACCCGATTTCCGATAGCGCCCTGCTCCAG CGCCAGGCCGAGGACGCCGCCGAGCACGCGGCCTGGCAGCGGACGCTGAAGGACAAGGGCTGGGAAAACGGCTTGCCGGCCGGTGCCAGCCAGCAGGAAC GCACCGACTATGCCATCGGCATGGCCCGCGACCAGGCCGCCGCCCAGCGCCAGTACCAGGGCAGCCTGGTCAAGGCCGGTGCCGGCAGCCTGGTCCTGAG CGGCGACAGCACCTATCGCGGGCCGACCCTGGTCGATGGCGGGCTGCTCAGCGTCGACGGTTCGCTGCTGTCCGCCGTCGAAGTCAATGCCGGCGGCACC CTCGGCGGCAGCGGCAGGATCGGCGGCCTGCTGGCGCGCTCCGGCGGCACGGTGGCCGCGGGCAACTCCATCGGCACCCTGGAGGTCGCCGGGGACCTGC GCTTCGAATCCGGCTCGACCTACGCGGTGGAGCTTTCGGAAAGCGCCAGCGACCGGATCGTCGCCAGCGGCAAGGCGAGCATCGCGGGCGGCAATGTCAC CCTGGCCATGGAAAACAGCCCCGACCTGCTCAGCCAGTCCCAGGTCGAGAGCCTGGTCGGCCGCCGCTACGACATCCTCGACGCCGCCGGCGGCATCGAC GGGCGCTTCGACGCGGTATTGCCGAACTACCTGTTCCTCGGCGGCACCCTGGACTACGCGGCCAACGCCATCCGCCTGGATATCGGACGCAACGGCACGG CCCTCGCCAGCGTCGCGCAGACGCCCAACCAGGCGGCGGTCGCTGGTGCCGTGGAAGCGCTCGGCGCCGGCAACCCGGTCTACGAAAGCCTGCTCCTGTC GGAAAACGCCGCAACCGCCCAACGGGCCTTCCAGCAATTGTCCGGGGAAATCTACCCGGCGCTCGCCGGCCTGTTGCTCAACGACAGCCGCTATCTGCGC GACAGCGTCGGCGAACGCCTGCGCCAGACCAGCGACGGCGAGGACGGCGGGGAGGCTCCCGAAGGCTGGTTCAAGGCGCTCGGCTCCTGGGGCAAGAGCG CCGATGGCAGCCACGGCAGCGAAGGCTACCGGCATTCGGTCGGCGGCTTCCTGCTCGGCGTCGACAGCCAGGTCGCCAGCGACACGCGCCTCGGCCTGGT GGCCGGCTACAGCAACAGCTCGCTGAACATGGACAGCAGCCTGCAATCCTCCGCCAGCATCGACAGCTACCACCTCGGCGCCTACCTCGGCCGGCAATTG CAGCAATGGCGCCTGAGCCTCGGCGCGGCGCACGCCTGGCACCGCGCCGAGGTCAAGCGCGACCTGCAATACGGCGCCGTGGCCGGCAAGCAGAAGGCCA AGCTCGACGCACAGAGCAGCCAGTTGTTCGCCGAGGCCGCCTACGCGCTGGGCTGGCACAGCCTGGAGCTGGAACCCTTCGCCGGGCTGGCCTACGTGCA CGTCGCCAGCGATGACTTCCGCGAACGCGGTAGCGCCGCGGCCCTGGAGGGTGGCGACGACAACCTGGACGCCGCCTTCACCACCCTGGGCCTGCGCGCG AAACGGCATTTCGAGCTGGATGCCGAACGCCGCCTGGCGCTCTCCGGCACCCTCGGCTGGCGCCACAACCTGAGCGACACCACCCCGCAACGCCACCTGG CGTTCGCCAGCGGCAGCCAGCCATTCAGCGTGGAAAGCGTGGCCCTGTCCCGCGACGCCGCGCTGCTCGGCGTCGACGCCAGCCTCGCGGTGAATCGCGA AGTGAGCGTGCGGCTGGGCTACAACGGCCTGCTGGGCAGCCGCGAGAAGGACCATGGCGTCGGACTGGCCGTCGACTGGCGTTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTTCGGTTACGAGGGCATGCCGTCCGTTGGATGGGTTCCGGCGGGCGGCAAGGGGAAAAAGCCACTTCATTGCCCTCGGTCACGAAACCGCTGCAAATAT GAGAAAAAGACCTAACTAAAGGATTCATGCGAAATGCATAGCGCTATACTGTCCATCCAGCGCTGTACTATCCCTTCCAGCGCTGATCGCGACCCGGTGC CCGCACCACCGTGCCGCACGAGCCCCGGAGATCCGCACCTCCGGGGCTCACCTTTTGCCCCTCTCGCGCCCTCCTTCCCCGGCTGAGCCCCTGCCCCTGC AAATCCGCGACGAATGGCCGCAATCCGGCAATCCGATGAACGAGCGGCCGAACGGCGGGCGCCCAGGCTGCCTGCGCACAGTCGCGGAACGGGTCAGGCC TGGCGGAAGAAGATCATGCCGAACAGCACCGCCAGGGCGCTGAGGAACGACAACCCGGTTTGCCCCAGGACCACCAGGATCGCGGCCGCCGCCGTGCTCA
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Amino Acid Sequence |
>serine protease
MTDARPFRPRPTSLSAALLLGAWIAQPATAAYVETGRPGDPASWRSAEYQQDWGLERMRADQAYAAGIDGQGVKIGEMDSGFDPSHPDTPASRYQPVTAS GTYVDGTPFSVSGAMNGNNDSHGTHVGGTLGASRDGVGMHGVAYAAQVYVANTNQNDSFLFGPTPDPNYFKAAYQALADAGVRAINNSWGSQPKDVSYET LDGLHAAYAQHYGRSTWVDAAAGVSRQGVINVFSAGNSGYANASVRSALPYFQPDLEGHWLAVSGLDQQNGQRYNRCGIAKYWCITTPGRLINSTMPGGG YANKSGTSMAAPHATGALALVMQRYPYLNNEQALQVLLTTATQLDGTPTGAPTDTVGWGVPDLGRAMHGPGQLLGRFEANLPAGLRDEWSNPISDSALLQ RQAEDAAEHAAWQRTLKDKGWENGLPAGASQQERTDYAIGMARDQAAAQRQYQGSLVKAGAGSLVLSGDSTYRGPTLVDGGLLSVDGSLLSAVEVNAGGT LGGSGRIGGLLARSGGTVAAGNSIGTLEVAGDLRFESGSTYAVELSESASDRIVASGKASIAGGNVTLAMENSPDLLSQSQVESLVGRRYDILDAAGGID GRFDAVLPNYLFLGGTLDYAANAIRLDIGRNGTALASVAQTPNQAAVAGAVEALGAGNPVYESLLLSENAATAQRAFQQLSGEIYPALAGLLLNDSRYLR DSVGERLRQTSDGEDGGEAPEGWFKALGSWGKSADGSHGSEGYRHSVGGFLLGVDSQVASDTRLGLVAGYSNSSLNMDSSLQSSASIDSYHLGAYLGRQL QQWRLSLGAAHAWHRAEVKRDLQYGAVAGKQKAKLDAQSSQLFAEAAYALGWHSLELEPFAGLAYVHVASDDFRERGSAAALEGGDDNLDAAFTTLGLRA KRHFELDAERRLALSGTLGWRHNLSDTTPQRHLAFASGSQPFSVESVALSRDAALLGVDASLAVNREVSVRLGYNGLLGSREKDHGVGLAVDWRF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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