Pseudomonas aeruginosa PAO1, PA3313

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01098
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01098
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01098 JCVI: phosphate/phosphite/phosphonate ABC transporter substrate-binding protein IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 54 294 1.3E-76
PANTHER PTHR35841 PHOSPHONATES-BINDING PERIPLASMIC PROTEIN - - 58 331 1.3E-43
Gene3D G3DSA:3.40.190.10 - - - 83 302 1.3E-60
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 101 283 4.36E-41
CDD cd13572 PBP2_PnhD_2 - - 79 325 1.00459E-123
Gene3D G3DSA:3.40.190.10 - - - 162 269 1.3E-60
Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein - - 82 321 2.0E-69
MobiDBLite mobidb-lite consensus disorder prediction - - 1 31 -
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 78 307 0.0056
NCBIfam TIGR04553 JCVI: putative selenate ABC transporter substrate-binding protein IPR030836 Putative ABC transporter periplasmic binding protein PhnD-like 79 335 9.4E-113

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.