Pseudomonas aeruginosa BL04, Q058_00350
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL04 genomic scaffold adgfK-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCTGGTGGCTTTCCAGGCCCAGCCGGTGCAAGGCGTTGGCGGTCTGGGTGACGCGGGCGAACAGCTCGGCATAGCTGATCCGCAACGGTTCTTCGGC GGCGCTGCCATGCAGCAGGCAGCTCAGGGCGATACGCTGGCCGTGGCGCTGGGCTGAGCGTTGCAACAGTTCGTAGGTGCTGGACGGCAGGTCGCGCTGT TCCAGCGGCACGCGTTCCAGGGCTTCGATATCGCTCAGCCCGGCGATCGATGGGGACGGATTCATGGTTTTCTTGTTCTTCCGTTGGTGAGTGGGCGGAC ACTCGCCGGATCGCTCCGGCACCGTCCCGAAGATGCCACCCCCGTCGCCGCCCTACCGTTGTCTTTTTGTAGCGCGCCGCCGGTCGCACGCACGAACCCT CCCGGAGGCTGCCCCGGGAGCTTCGCGCAGCCCCCTCCAGGCCCCGTCCGGCCAGGGCTGGAGGGCGCCGGCCAAGCATGGATTTCTCCCCGCTGGCAAC
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| DNA Sequence for Gene |
>Q058_00350
ATGCTTTACACTGGCGCCCGTTCATTCCTTAACCACTACGAGATCGCCGTGCTCAAAGCACTCAAGAAAATCTTCGGCAAGGCCGACGGAACCCAGCCGC AGAGCGGTTCCTCCCCGGTCCCGCAAGGCCCTGCCGGCGCTACCGCGAAAGGTACCGCCCCCACCGGCGAAAAGCCGACCGAGAAACGCCCACGCAAACC GCGCGCCCCACGCGCCGACAACGAGTCCGGCGCCCCGCGCGCCGCTGAAAAGGCCGAGAAAGGCGAAAAGCCCGCCAAACCCGCCGCCAAAGAAGGCCGG GACGCCAAGCCGCGCAGCGACAAGCCGCGCCGCGAACGCAAGCCGAAGCCGGTGGACAACTGGAAGCTGGAAGACTTCGTGGTCGAACCGCAGGAAGGCA AGACCCGCTTCCACGACTTCAACCTCGCCCCGAGCCTGATGCACGCCATCCATGACCTCGGCTTCCCCTACTGCACGCCGATCCAGGCGCAGGTACTGGG CTTCACCCTGCGCGGCCAGGACGCCATCGGCCGCGCCCAGACCGGTACCGGCAAGACCGCCGCGTTCCTCATCTCGATCATCACCCAGTTGCTGCAGACC CCGCCGCCGAAAGAGCGCTACATGGGCGAGCCGCGCGCGCTGATCATCGCCCCGACCCGTGAACTGGTGGTACAGATCGCCAAGGACGCCGCGGCGCTGA CCAAGTACACCGGGCTGAACGTGATGACCTTCGTCGGCGGCATGGACTTCGACAAGCAACTCAAGCAGCTGGAAGCGCGCTTCTGCGACATCCTGGTAGC CACCCCAGGCCGTCTGCTGGACTTCAACCAGCGCGGCGAGGTGCACCTGGACATGGTCGAGGTGATGGTCCTCGACGAAGCCGACCGCATGCTCGACATG GGCTTCATCCCGCAGGTCCGGCAGATCATCCGGCAGACCCCGCACAAGGGCGAACGCCAGACCCTGCTGTTCTCGGCGACCTTCACCGACGACGTGATGA ACCTCGCCAAGCAGTGGACCGTCGATCCGGCGATCGTCGAGATCGAGCCGGAGAACGTCGCCAGCGACACCGTCGAGCAGCATGTCTACGCCGTGGCCGG CAGCGACAAGTACAAGCTGCTGTACAACCTGGTGGCGCAGAACAACTGGGAACGGGTGATGGTCTTCGCCAACCGCAAGGACGAAGTCCGCCGCATCGAG GAACGCCTGACCAAGGACGGCATCAGCGCCGCCCAGATGTCCGGCGACGTACCGCAGCACAAGCGCATCCGCACCCTGGAAGGCTTCCGCGAAGGCAAGA TCCGCGTCCTGGTGGCAACCGACGTGGCCGGCCGCGGCATCCACATCGACGGCATCAGCCATGTGATCAACTTCACCCTGCCGGAAGACCCGGACGACTA CGTGCACCGTATCGGTCGTACCGGCCGCGCCGGCGCCTCGGGCACCTCGATCAGCTTCGCCGGCGAGGACGATGCCTTCGCCCTGCCGCCGATCGAAGAG CTGCTGGGCCGCAAGATCACCTGCGAGATGCCGCCGGCCGAACTGCTCAAGCCGGTACCGCGCAAGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCAGGCGTGGAGAAAAAAGGCGAAGCCATCCGGCTTCGCCTTTTTCGTTTCTGCGACACGCAGGTGCCGCCGTCGGTCATCGAGGCAGGTCGGCGCTT GCCCAGCAATACCTTAAAGTCCAGAATGGACAAATTGTTTACATCCATTCCGGAGATCGCATGAGCGCCGCCACTCCCCTGATCGTCCAGCAGGCCGAAG CCGAGCAACTGCTCGCCCGTATCGACGTCCTCCAGGCCATGCGCCAGCTGTTCCTCGACCTGGCCGCCGGCCAGGCGCTCCAGCCGGCCCAGCAACTGGT GGAGTTCCCCGCCGGTCGCGGCGATTTCATCAACTACCTCGGCGTGCTCGCCCAGGAACAGGTCTACGGAGTCAAGACTTCACCCTACATCGTTCGCGAA CAGGGCCCGTTGGTCACCGCCTGGACCCTGCTGATGTCGATGCAGACCGGCCAGCCCTTGCTGCTCTGCGATGCCGCCCGGCTGACCACCGCGCGCACCG
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| Amino Acid Sequence |
>RNA helicase
MLYTGARSFLNHYEIAVLKALKKIFGKADGTQPQSGSSPVPQGPAGATAKGTAPTGEKPTEKRPRKPRAPRADNESGAPRAAEKAEKGEKPAKPAAKEGR DAKPRSDKPRRERKPKPVDNWKLEDFVVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQT PPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDM GFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIE ERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEE LLGRKITCEMPPAELLKPVPRKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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