Pseudomonas aeruginosa PAO1, PA3296 (phoA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0043952 protein transport by the Sec complex
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 3138529 Reviewed by curator
Molecular Function GO:0004035 alkaline phosphatase activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 2129542 Reviewed by curator
Biological Process GO:0015628 protein secretion by the type II secretion system
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 3138529 Reviewed by curator
Biological Process GO:0008152 metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0016791 phosphatase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00245
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Central intermediary metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00730 Thiamine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00790 Folate biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Folate biosynthesis ECO:0000037
not_recorded
PseudoCAP Xcp type II secretion system ECO:0000037
not_recorded
MetaCyc diethylphosphate degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Xenobiotics metabolism ECO:0000037
not_recorded
KEGG pae00627 Aminobenzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc NAD/NADH phosphorylation and dephosphorylation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
PseudoCAP Glycerolipid metabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00113 Alkaline phosphatase signature IPR001952 Alkaline phosphatase 162 182 3.4E-47
PRINTS PR00113 Alkaline phosphatase signature IPR001952 Alkaline phosphatase 324 353 3.4E-47
PANTHER PTHR11596 ALKALINE PHOSPHATASE IPR001952 Alkaline phosphatase 16 430 1.6E-92
SUPERFAMILY SSF53649 Alkaline phosphatase-like IPR017850 Alkaline-phosphatase-like, core domain superfamily 40 474 0.0
PRINTS PR00113 Alkaline phosphatase signature IPR001952 Alkaline phosphatase 225 235 3.4E-47
Pfam PF00245 Alkaline phosphatase IPR001952 Alkaline phosphatase 435 473 8.7E-7
Pfam PF00245 Alkaline phosphatase IPR001952 Alkaline phosphatase 68 434 8.2E-116
PRINTS PR00113 Alkaline phosphatase signature IPR001952 Alkaline phosphatase 125 140 3.4E-47
Gene3D G3DSA:3.40.720.10 Alkaline Phosphatase, subunit A IPR017850 Alkaline-phosphatase-like, core domain superfamily 28 475 0.0
CDD cd16012 ALP IPR001952 Alkaline phosphatase 69 473 1.2051E-113
PRINTS PR00113 Alkaline phosphatase signature IPR001952 Alkaline phosphatase 68 88 3.4E-47
SMART SM00098 alk_phosph_2 IPR001952 Alkaline phosphatase 69 475 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.