Pseudomonas aeruginosa BL05, Q059_04187
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL05 genomic scaffold adgfv-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACGACATCCTCCAGGGTGGGCTTGCCCTCACCAGCGGCAACTACCAGCTCAACTACCAGGGCAACCTGCTGAGCATCCTGCCGCTGCCGGTCACGCCGG GCGACCTGGGGCAACTGGCAGCGCTCTCCGACTTGCGCGAACTGCAGAAGGGGCGCGATCCGGATACTCCCGGGGATGCGGTCTACCGCACCACCACGCT GGAAAACCCGTTCCTCGAAAACCCGTTCCTGCGCGCCTACGCTCTGGGCATGGACGTCAGCGATCCTAACCTGCTGCCGGCTACCGCCGCGGGTCCGGCG GAGGACGCCAGCGCCAAGCGGGTGGGGCAGTTCACCGATCGTCCGCTCAGGGCAGAGGCCGAGAGTGGGGCGGGTTGCTCGAACCAGAGCTACCTGGCCG ACTACTGGAGCTGCTTCAACAAGCCTCTGAATTTCTAACCCTTTTCGCAATGCGCACTATCGTCTCCGGGCGGTAGTGCGTCATCTGCCCGAGGTGAATG
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| DNA Sequence for Gene |
>Q059_04187
ATGAAACCTTCGCAATGGACGCTTCGCTGGGTGACGCTCTGTGGCTGCGGGATGCTGGCTGCTTCCGCCGCCGCCGTGGAGTTGCCAGGGACTGTACAGC CATCCCAGCTCGATGAACGCTTCAAGCCCCGCAGCGAGCCGCAAGCCAAGCCCGAGGCGCCGCTGGTGGTGCCCAAGCAGGTCGCGCCGCAAGGCAGCGA ACAGATCCGCTTCGAACTGCGCGAGATACGCATCGAAGGCAACACCCGCTATGACAAGGCGGTGCTCGAGTCCTATTACCAGCATATGCTCGGCAAGCAG GTGTCCCTGGCCGAACTGGTCGACCTGGCCAACCGCCTCACCGCCAAGTACCGCCAGGACGGCTACCTGTTGACCCAGGTAGTGGTGCCGGAGCAGAGCA TCGAGGGCGGCAAGGTACGCCTGCAGGTGATCGAGGGTTACCTCGAACACGTGCAGATCAAGGGAACCGTCGATGGGCCGCGGGTGCGAGTGGAGGAACT GCTCGCGCCGCTGACCGAAAAACGTCCGCTGGATGCCGATACCCTGGAGCGCGGCCTGCTGCTGGTCGGCGACCTGCCGGGGGTCAACGTGCAGAGCGTG CTCAGCCCGGGTCAGGCGCTGGGCTCGTCGAACCTCGACGTGGCCTTGCAACAGCAGCGATACGAAGGCTTCGTCAGCCTCGACAACCGCGGCTCGCACT ACACCGACCCGACCACCCTGGCCTTCGGCGCCACCGAGTTCTCCCGCCTGGGCTTCTACGAGCAGATCGACGTGCTCGGCGCGATCTCGCCGTTCAGCGA TGCCACCCGCTACATCCAGTTGCGCGGCACGTTGCCGCTGGGTGGCATGTTCGCCGGCGATACCCTGCAGATCATGGGTTCCTATTCGAAGGTCAACCCG GACATCCCGGACTCGGTATTCCCCTTCGACAGCGTCAGCAAGAGCACCGAAGGCAGCATTTCCTACAACCATCCCTTCATCCGCTCGCGCTCGCAGAACC TGAGCGGCGGCCTGGCGTTGCAGTGGAAGGATACCGAGACCCGCCTGCGCGACTTCGCCAGCGACGCCTCGAACCCCGGTCGTGACCATGTGCGGGTGTT CCAGCAACGCCTGACCTATGACTGGGTCGACCGCTGGATGGGCATCAACCTGGCGGAGGTGCGCAACAACATCGGCCTGGACATGTGGGGCGCGACCAAG AAGGACGATGAACGTCGTTCCCGCGAAGTGGCCGACGGACGTTTCGTCTATCTCAACGGCAACATCGGGCGTCTGCAAGGGCTCGGCGGACCCTGGTCGG TGTATGGCGAGTTGCAATGGCAGTACAGCTTCGACCCGTTGCTGCCGAGCGAGCGCTTCGGCGTCGGCGGCAGCGGGATCGGTCGCGGCTTCGCCCCGGG CAACATCACCGGTGACCGTGGCTTCGCCCTGAAGCTCGAACCGCGCTATGGCCAGGCGGTGGGCTATAGCTGGCTGCGCAGCTACCAGGCCTACGCTTTC TACGACTGGGGCAAGACCTACAACCTCGACGTGGACGATGACGAGCAGCAGAAGCTCGGCTCGATCGGTGCCGGGGTGCGCTTCAACCTCACCGACCAGT TGTCGTTCAACCCGGAGATTGCCCGCCAGGTCATCGGCGAGCCAGCCGACCAGCGCGATGGGAAGCGCGAGACGCGGGTCCTGTTCAACGTGGTGGCGCG CTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCCTGCCGGCCTCCGTTCCGGAGGCTGCTGACGGAGCCCCTCTCCGGTTCTGCGGAGAGGGAGGTCCGTGCTCAATTCCGAGTGTTTTTCTCAAACTTT CGATTTCTTCGATTTTTCATATCGATGCCGTCAATCCGTGCCAAGGCCGGTCGGAGAGGCGTATTCTTGCTGTAACTCCTGTACTAGAGCGGTTCTTCGC ACTATTTCAAACGTCGATGAATACTATTGGCGCGCTTCGTTTTCCAATCGAGTTTCCCGAACAGAGAATGGCCCCACGTAACGAATACCTGGAGCCACTG CCATGAAACGCCCGCTGATCCTCGCCATCGCCCTTGCTACCCTGACCGCCAATGCCGCCTTCGCTGCACCGCGGGTCGAATCCATCGCCCTGCGCGGTGC CCAACAACTGATCGCCTCCGACGGTTCCGACCGTACCCTCGAACGCCTGCGCAAGACCCAGGCGCCGCGCGTCCAGGAAGAACGCCGGGTCGCCGAAAGC
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| Amino Acid Sequence |
>hemolysin activation/secretion protein
MKPSQWTLRWVTLCGCGMLAASAAAVELPGTVQPSQLDERFKPRSEPQAKPEAPLVVPKQVAPQGSEQIRFELREIRIEGNTRYDKAVLESYYQHMLGKQ VSLAELVDLANRLTAKYRQDGYLLTQVVVPEQSIEGGKVRLQVIEGYLEHVQIKGTVDGPRVRVEELLAPLTEKRPLDADTLERGLLLVGDLPGVNVQSV LSPGQALGSSNLDVALQQQRYEGFVSLDNRGSHYTDPTTLAFGATEFSRLGFYEQIDVLGAISPFSDATRYIQLRGTLPLGGMFAGDTLQIMGSYSKVNP DIPDSVFPFDSVSKSTEGSISYNHPFIRSRSQNLSGGLALQWKDTETRLRDFASDASNPGRDHVRVFQQRLTYDWVDRWMGINLAEVRNNIGLDMWGATK KDDERRSREVADGRFVYLNGNIGRLQGLGGPWSVYGELQWQYSFDPLLPSERFGVGGSGIGRGFAPGNITGDRGFALKLEPRYGQAVGYSWLRSYQAYAF YDWGKTYNLDVDDDEQQKLGSIGAGVRFNLTDQLSFNPEIARQVIGEPADQRDGKRETRVLFNVVARF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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