Pseudomonas aeruginosa BL05, Q059_03319
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL05 genomic scaffold adgfv-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGGAGCAGGGCTTTGGCGTCCATGTCGGGGTTCCGCTGGGGATGGAAAGGGCATCATGGCTGAGGTGGCTTTATTCGTCGAACGATGGCTGGCCCTGC CGGTAGATCGGCCAGGACTTCATGCGCTGCGGAAACGGCCTGACCAAGTGCAGCGGCTTGCAATCAAAAACGCTGGGCTCGCAATCAGCGTGGTTTTGTC CGGAAGCTCGCGAAGGGGCGGCATGGATGAATTTTGAAAGTGGGAGTTCGTTAATGAACCGAAGGTATGCGGCTTCCGTGACTGGCCGGGGTAGATGAGG TGTGCGTTAAGGAAATGACCGTTTGACGCAGGCGCGATTATAAGAGGTGAGAGAGCGCACCTTCTGGATCATCTAAACACGGGATATTGAAGTTGATTGC AGTGTATTGCCGATGCATTGGGGCTTATTGACTGGGAGAGGGTTCTCGAGGTGGGAGTCGCTCAATACATTACACTTTCAAATTAATGTAGGGGCGATCT
|
|
| DNA Sequence for Gene |
>Q059_03319
ATGGCTGTCAATGATTACGAACCTGGTTCGATGGTTATTACACATGTGCAGGGTGGTGGGCGTGACATAATCCAGTATATTCCTGCTCGATCAAGCTACG GTACTCCACCATTTGTCCCACCAGGACCAAGTCCGTATGTCGGTACTGGAATGCAGGAGTACAGGAAGCTAAGAAGTACGCTTGATAAGTCCCATTCAGA GCTCAAGAAAAACCTGAAAAATGAAACCCTGAAGGAGGTTGATGAACTCAAGAATGAAGCGGGGTTGCCAGGTAAAGCAGTCAGTGCCAATGACATCCGC GATGAAAAGAGTATCGTTGATGCACTCATGGATGCCAAAGCAAAATCGCTAAAGGTCATTGAGGATCGCCCGGCCAATCTTTATACGGCTTCAGACTTTC CTCAGAAGTCAGAGTCGATGTACCAGAGTCAGTTGCTGGCCAGCCGAAAATTCTATGGAGAGTTCCTGGATCGCCATATGAGTGAGCTGGCCAAAGCGTA CAGCGCCGATATCTATAAGGAGCAAATCGCTATCTTGAAACAAACGTCTCAAGAGCTGGAGAATAAAGCCCGGTCATTGGAAGCAGAAGCCCAGCGAGCC GCTGCTGAGGTGGAGGCGGACTACAAGGCCAGGAAGGCAAATGTCGAGAAAAAAGTGCAGTCCGAGCTTGACCAGGCTGGGAATGCTTTGCCTCAACTGA CCAATCCAACGCCAGAGCAGTGGCTTGAACGCGCTACTCAACTGGTTACGCAGGCGATCGCCAATAAGAAGAAATTGCAGACTGCAAACAATGCCTTGAT TGCCAAGGCACCCAATGCACTGGAGAAACAAAAGGCAACCTACAACGCCGATCTCCTGGTGGATGAAATCGCCAGCCTGCAAGCCCGGCTGGACAAGCTG AACGCCGAAACGGCAAGGCGCAAGGAAATCGCTCGTCAAGCGGCGATCAGGGCTGCCAATACTTATGCCATGCCAGCCAATGGCAGCGTTGTCGCCACCG CCGCAGGCCGGGGTCTGATCCAGGTCGCACAAGGCGCCGCATCCCTTGCTCAAGCGATCTCCGATGCGATTGCCGTCCTGGGCCGGGTCCTGGCTTCAGC ACCCTCGGTGATGGCCGTGGGCTTTGCCAGTCTGACCTACTCCTCCCGGACTGCCGAGCAATGGCAGGACCAAACGCCCGATAGCGTTCGTTACGCCCTG GGCATGGATGCCGCTAAATTGGGGCTTCCCCCAAGCGTAAACCTGAACGCGGTTGCAAAAGCCAGCGGTACCGTCGATCTGCCGATGCGCCTGACCAACG AGGCACGAGGCAACACGACGACCCTTTCGGTGGTCAGCACCGATGGTGTGAGCGTTCCGAAAGCCGTTCCGGTCCGGATGGCGGCCTACAATGCCACGAC AGGCCTGTACGAGGTTACGGTTCCCTCTACGACCGCAGAAGCGCCGCCACTGATCCTGACCTGGACGCCGGCGAGTCCTCCAGGAAACCAGAACCCTTCG AGTACCACTCCGGTCGTACCGAAGCCGGTGCCGGTATATGAGGGGGTGACCCTCACACCGTTGAAGACCGAGCCGGAGTCCTATCCGGGAGTGCTACTGG ACCTAAACGATCTGATCGTGATTTTCCCGGCGGATTCTGGAGTCAAACCTGTTTATGTAATGCTCAGTAGTCCTCTTGATAGTGGTATCTTCACACGGAG GCAACTACAGAAAAAATTTGATAGCCACAAATATGATTTTGGGCTGGGTGAAAAAAGCGCCAATAATGGAACGCTTGCAGAGTTTAGGGATAAAATTCTT GAGCACCTTGCTGATCCTGCAACCGTAGAAAAAGGGACTTACCACTCCGAAGTAAAATCAAAAGTACATTACAATGCCAGGACTAATATTGTTGTTATCA TTGGAGAGGATGGGATGTTTGTTTCTGGGTGGAGGATTGAGCCTGGCACGGATCAATACAATTTTTACATGAAAAATGAGGTGCTTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GATGAGCGTGGAAATGATAGATATTGCAAAGAAGCTATTAGCCTCATCGATTGACGGGAAAACCTTCAGCGAAGAATTTTTTAAGACTTGGAGGTCCGAG CGCGATTCAGGGGTGCTGGCCCAAGATGATGCATCGCTTGGGAGATGCTTGAGTTTAATGTTTGGTCTGGCCGACAGCTTTACCGAGGGAAAGAAAGAGC GCCCAGGTGAACTTACAGAGGGTGAACTTAAAATAGCTCTGAGTGATTTATTGAAAGAATACAAATACATATAATAAGCCGAACTTTAGTAGGCGTAGAC AGAGGCCTCTGTGAGGGGCTTCTGTCTTCTCGTAGAGAGTGGCTTCCCGTCTCGAGATGCAGAAGCACGTCGACTACTAGCAAGATAAACCATAAAAGCC TGGTAGAGCAGTTCGATGCCAAGCCTACGGAGGTTAGTGCGTTGTTCAGCAATACGCTGGACCCGGCGCGAGCGACCGAGTTGCAGGAAAAGATGCAAAG
|
|
| Amino Acid Sequence |
>pyocin-S2
MAVNDYEPGSMVITHVQGGGRDIIQYIPARSSYGTPPFVPPGPSPYVGTGMQEYRKLRSTLDKSHSELKKNLKNETLKEVDELKNEAGLPGKAVSANDIR DEKSIVDALMDAKAKSLKVIEDRPANLYTASDFPQKSESMYQSQLLASRKFYGEFLDRHMSELAKAYSADIYKEQIAILKQTSQELENKARSLEAEAQRA AAEVEADYKARKANVEKKVQSELDQAGNALPQLTNPTPEQWLERATQLVTQAIANKKKLQTANNALIAKAPNALEKQKATYNADLLVDEIASLQARLDKL NAETARRKEIARQAAIRAANTYAMPANGSVVATAAGRGLIQVAQGAASLAQAISDAIAVLGRVLASAPSVMAVGFASLTYSSRTAEQWQDQTPDSVRYAL GMDAAKLGLPPSVNLNAVAKASGTVDLPMRLTNEARGNTTTLSVVSTDGVSVPKAVPVRMAAYNATTGLYEVTVPSTTAEAPPLILTWTPASPPGNQNPS STTPVVPKPVPVYEGVTLTPLKTEPESYPGVLLDLNDLIVIFPADSGVKPVYVMLSSPLDSGIFTRRQLQKKFDSHKYDFGLGEKSANNGTLAEFRDKIL EHLADPATVEKGTYHSEVKSKVHYNARTNIVVIIGEDGMFVSGWRIEPGTDQYNFYMKNEVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|