Strain | Pseudomonas aeruginosa BL05 genomic scaffold adgfv-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGGCAGGCGGTGTTGGAGATGAACTTCGAGTACGTCAACTCGGAGGTCAACCCGGCCATGGCCAACATCGTCAGTCCCAGCGAGGTGGTGGTGGTCTC CACCTTCCACATCGAACTGGACGGCGGTGGCGGCGACCTGCACATCACCATGCCCTACTCGATGATCGAGCCGATCCGCGAGATGCTCGACGCCGGTTTC CAGTCCGACCACGACGACCAGGACGAGCGCTGGATCAAGGCCCTGCGCGAGGACGTGCTGGACGTCCAGGTACCGCTCGGCGCCACCGTGGTCCGCCGCC AGCTCAAGCTGCGCGACATCCTGCACATGCAGCCGGGCGACGTGATCCCGGTGGAGATGCCGGAACACATGGTGATGCGCGCCAACGGCGTGCCCGCCTT CAAGGTCAAGCTGGGCGCCCACAAGGGCAACCTGGCGCTACAGATTCTCGAAGCGGTCGAGCGCTCGCGCTGACCGCTTCCCCCGGAGGAAAGACGAACC
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DNA Sequence for Gene |
>Q059_03110
ATGGCAGACGAAGAAAAAGTGACCACCGAGGAACAGGCACTGGCCGACGAATGGGCGGCGGCGCTGGCCGAGGCGGGCGACGCCAGCCAGGACGACATCG ATGCGCTGATGGCCCAGGGCGGCGCGACCCCCGTGGCGGAGCCGAGCACCCCGCGGGCGCCGATGGAAGAGTTCGGCGCTTCGCCGAAGGCGCCGACCAT TTCCGGCCTGGAGGGGCCCAACCTGGATGTGATCCTGGACATCCCGGTGACCATCTCCATGGAAGTCGGGCATACCGACATCAGCATCCGCAACCTGCTG CAGCTCAACCAGGGGTCGGTGATCGAACTCGATCGCCTGGCCGGCGAGCCGCTGGACGTACTGGTCAACGGCACCCTGATCGCCCACGGCGAGGTGGTGG TGGTGAACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGTCCCAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CATGCGTCGCTACCTGTTCGCCGGCTTCCTGCCGGCACTCGCCTCGCTGAGCGCGCCGCTGTGCGCCGCCGAGGGGACGACGGGTGCCGCCGCGCCGACG GTGGGCGCCGCTTCCGGCGCCGCCGCGCAACTGGCCCAACTGGTGCTCGGCCTGGGCCTGGTGATCGGCCTGATCTTCCTGCTCGCCTGGCTGGTGCGCC GGGTGCAACAGGCCGGTCCGCGCGGCAACCGCTTGATCCGCACCCTTGCCAGCCAGCCGCTGGGTCCGCGCGACCGGCTGGTGCTGGTGCAGGTCGGCGA GGAGCAGATCCTGCTCGGCCTGACGCCCGGCCGGATCACGCCGTTGCACGTGCTCAAGGAGCCGATACACCTGCCGGACGGCGAGCCGGCCACGCCGGAA TTCGCCCAGCGCCTGCTGGAGCTGCTGAACAAGGACCCCAAGGGCAAGCCATGACTCCGCGCATCTCCCTGGCCGGCGCGCTCGCCGCGCTCTGCCTCCT
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Amino Acid Sequence |
>flagellar motor switch protein FliN
MADEEKVTTEEQALADEWAAALAEAGDASQDDIDALMAQGGATPVAEPSTPRAPMEEFGASPKAPTISGLEGPNLDVILDIPVTISMEVGHTDISIRNLL QLNQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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